RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 HTN1P15515 57 aa19.1■□□□□ 0.65
TOP2B-204ENST00000435706 PTGDSP41222 190 aa19.1■□□□□ 0.65
TOP2B-204ENST00000435706 CCL20P78556 96 aa19.1■□□□□ 0.65
TOP2B-204ENST00000435706 ANOS1P23352 680 aa19.1■□□□□ 0.65
TOP2B-204ENST00000435706 GPX4P36969 197 aaPredicted RBP19.1■□□□□ 0.65
TOP2B-204ENST00000435706 TBR1Q16650 682 aa19.1■□□□□ 0.65
TOP2B-204ENST00000435706 PCSK4Q6UW60 755 aa19.1■□□□□ 0.65
TOP2B-204ENST00000435706 C1QL4Q86Z23 238 aa19.1■□□□□ 0.65
TOP2B-204ENST00000435706 PRR32B1ATL7 298 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 GDF9O60383 454 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 OR5P3Q8WZ94 311 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 MS4A5Q9H3V2 200 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 GOLT1AQ6ZVE7 132 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 CXCL1P09341 107 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 CCL8P80075 99 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 LEAP2Q969E1 77 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 FCGR2BP31994 310 aaPredicted RBP19.09■□□□□ 0.65
TOP2B-204ENST00000435706 MBNL2Q5VZF2 373 aaKnown RBP19.09■□□□□ 0.65
TOP2B-204ENST00000435706 ITLN1Q8WWA0 313 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 WFDC1Q9HC57 220 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 SPCS1Q9Y6A9 102 aa19.09■□□□□ 0.65
TOP2B-204ENST00000435706 ATG2BQ96BY7 2078 aa19.08■□□□□ 0.65
TOP2B-204ENST00000435706 NPIPB3Q92617 1050 aa19.08■□□□□ 0.65
TOP2B-204ENST00000435706 TRIP12Q14669 1992 aaPredicted RBP19.08■□□□□ 0.65
TOP2B-204ENST00000435706 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.65
TOP2B-204ENST00000435706 FBLN5Q9UBX5 448 aa19.08■□□□□ 0.65
TOP2B-204ENST00000435706 ADIPOQQ15848 244 aa19.08■□□□□ 0.64
TOP2B-204ENST00000435706 SCARF2Q96GP6 870 aaPredicted RBP19.08■□□□□ 0.64
TOP2B-204ENST00000435706 RBFOX2O43251 390 aaKnown RBP eCLIP19.08■□□□□ 0.64
TOP2B-204ENST00000435706 FAM117AQ9C073 453 aa19.08■□□□□ 0.64
TOP2B-204ENST00000435706 ZNF638Q14966 1978 aaKnown RBP19.08■□□□□ 0.64
TOP2B-204ENST00000435706 SEC16AO15027 2179 aa19.08■□□□□ 0.64
TOP2B-204ENST00000435706 CYTL1Q9NRR1 136 aa19.07■□□□□ 0.64
TOP2B-204ENST00000435706 RABAC1Q9UI14 185 aa19.07■□□□□ 0.64
TOP2B-204ENST00000435706 hCG_38984A0A1B0GV85 526 aa19.07■□□□□ 0.64
TOP2B-204ENST00000435706 FBLN7Q53RD9 439 aa19.07■□□□□ 0.64
TOP2B-204ENST00000435706 MRPL13Q9BYD1 178 aaKnown RBP19.07■□□□□ 0.64
TOP2B-204ENST00000435706 PROB1E7EW31 1015 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 STARD6P59095 220 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 FAM214BQ7L5A3 538 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 APOHP02749 345 aaPredicted RBP19.06■□□□□ 0.64
TOP2B-204ENST00000435706 C1QTNF9P0C862 333 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 PSG9Q00887 426 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 B4E171 279 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 AMBPP02760 352 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 LGALS3P17931 250 aaKnown RBP19.06■□□□□ 0.64
TOP2B-204ENST00000435706 GFRA1P56159 465 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 ATP5IP56385 69 aaPredicted RBP19.06■□□□□ 0.64
TOP2B-204ENST00000435706 SPOCK3Q9BQ16 436 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 A6NNC1 897 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 NDUFS6O75380 124 aaKnown RBP19.06■□□□□ 0.64
TOP2B-204ENST00000435706 EMP1P54849 157 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 IZUMO1RA6ND01 250 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 C1QTNF9BB2RNN3 333 aa19.06■□□□□ 0.64
TOP2B-204ENST00000435706 GPR6P46095 362 aaPredicted RBP19.06■□□□□ 0.64
TOP2B-204ENST00000435706 LYPD3O95274 346 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 LINC00305Q7Z4B0 112 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 REG1AP05451 166 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 CCDC144NLQ6NUI1 221 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 EAF1Q96JC9 268 aaPredicted RBP19.05■□□□□ 0.64
TOP2B-204ENST00000435706 IGFBP2P18065 325 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 NUTF2P61970 127 aaKnown RBP19.05■□□□□ 0.64
TOP2B-204ENST00000435706 KLK15Q9H2R5 256 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 RGPD3A6NKT7 1758 aaPredicted RBP19.05■□□□□ 0.64
TOP2B-204ENST00000435706 RGPD4Q7Z3J3 1758 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 TRAV8-6A0A0B4J262 113 aa19.05■□□□□ 0.64
TOP2B-204ENST00000435706 TDRD15B5MCY1 1934 aaKnown RBP19.05■□□□□ 0.64
TOP2B-204ENST00000435706 OR11H12B2RN74 326 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 SAMD13Q5VXD3 122 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 LRTM2Q8N967 370 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 OR11H1Q8NG94 326 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 OR11H2Q8NH07 326 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 KLF14Q8TD94 323 aaPredicted RBP19.04■□□□□ 0.64
TOP2B-204ENST00000435706 DUSP15Q9H1R2 295 aaPredicted RBP19.04■□□□□ 0.64
TOP2B-204ENST00000435706 TRBV24-1A0A075B6N3 115 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 IGHV3-48P01763 117 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 CX3CL1P78423 397 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 HIST1H1AQ02539 215 aaPredicted RBP19.04■□□□□ 0.64
TOP2B-204ENST00000435706 A0A1B0GWB2 263 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 ATXN7O15265 892 aaPredicted RBP19.04■□□□□ 0.64
TOP2B-204ENST00000435706 SLC25A53Q5H9E4 307 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 DERL1Q9BUN8 251 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 TMEM242Q9NWH2 141 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 TMEM160Q9NX00 188 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 C17orf98A8MV24 154 aa19.04■□□□□ 0.64
TOP2B-204ENST00000435706 PEX7O00628 323 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 COL5A3P25940 1745 aaPredicted RBP19.03■□□□□ 0.64
TOP2B-204ENST00000435706 TFPI2P48307 235 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 AMMECR1LQ6DCA0 310 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 WFDC3Q8IUB2 231 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 TTC9CQ8N5M4 171 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 PIKFYVEQ9Y2I7 2098 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 CGB1A6NKQ9 187 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 SYNGR3O43761 229 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 SAPCD1Q5SSQ6 148 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 PAQR4Q8N4S7 273 aaPredicted RBP19.03■□□□□ 0.64
TOP2B-204ENST00000435706 SCGB1A1P11684 91 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 ID1P41134 155 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 RPL39P5Q59GN2 51 aa19.03■□□□□ 0.64
TOP2B-204ENST00000435706 C16orf92Q96LL3 132 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms