RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 RAB22AQ9UL26 194 aa8.63□□□□□ -1.03
CHRNA1-207ENST00000435083 PRELID3BQ9Y3B1 194 aa8.63□□□□□ -1.03
CHRNA1-207ENST00000435083 TMEM272A0A1B0GTI8 110 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 E7EUB6 86 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 PTGES3LE9PB15 166 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 ARL6IP5O75915 188 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 DHFRP00374 187 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 AREGP15514 252 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 GNB3P16520 340 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 TALDO1P37837 337 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 HES5Q5TA89 166 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 TMEM91Q6ZNR0 172 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 OR2C3Q8N628 320 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 UFD1Q92890 307 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 SLC2A9Q9NRM0 540 aa8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 MRPS7Q9Y2R9 242 aaKnown RBP8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 LSM2Q9Y333 95 aaKnown RBP8.62□□□□□ -1.03
CHRNA1-207ENST00000435083 UBE2CO00762 179 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 CLEC3BP05452 202 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 GADD45AP24522 165 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 RANBP1P43487 201 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 RPS25P62851 125 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 RPL30P62888 115 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 ARFRP1Q13795 201 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 UNQ9165/PRO28630Q6UXU0 137 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 TMEM217Q8N7C4 229 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 ZNF645Q8N7E2 425 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 STPG3Q8N7X2 389 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 OR10R2Q8NGX6 335 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 VSTM2AQ8TAG5 236 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 FBLIM1Q8WUP2 373 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 PHLDA1Q8WV24 401 aaPredicted RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 MARC2Q969Z3 335 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 OR2A7Q96R45 310 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 V9GY05 133 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 HERC2O95714 4834 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 IGKV1D-8A0A087WSZ0 117 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 IGHV3-35A0A0C4DH35 117 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 A0A1B0GW64 132 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 RAB27BO00194 218 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 MFNGO00587 321 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 KBTBD11O94819 623 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 REG1AP05451 166 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 CRYGCP07315 174 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 ZNF735P0CB33 412 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 C8orf88P0DMB2 117 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 DEFA4P12838 97 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 HIST1H1BP16401 226 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 HIST1H1DP16402 221 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 ATF4P18848 351 aaPredicted RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 CRHBPP24387 322 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 CALRP27797 417 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 PSMB6P28072 239 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 PSMD7P51665 324 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 TMEM167AQ8TBQ9 72 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 RNF183Q96D59 192 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 CENPOQ9BU64 300 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 MRPL27Q9P0M9 148 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 UFC1Q9Y3C8 167 aa8.61□□□□□ -1.03
CHRNA1-207ENST00000435083 TRBV7-1A0A0A6YYK4 115 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 MFSD2BA6NFX1 497 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 HSMCR30P0CW71 290 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 CD36P16671 472 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 CTRB1P17538 263 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 RPL35AP18077 110 aaKnown RBP8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 MAS1LP35410 378 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 CTRB2Q6GPI1 263 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 SSX9Q7RTT3 188 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 PUSL1Q8N0Z8 303 aaKnown RBP8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 OR4S2Q8NH73 311 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 TCTEX1D2Q8WW35 142 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 CXorf58Q96LI9 332 aa8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 SPAG8Q99932 426 aaPredicted RBP8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 RBMX2Q9Y388 322 aaKnown RBP8.6□□□□□ -1.03
CHRNA1-207ENST00000435083 KIR2DL5BA0A0G2JN68 375 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 KIR2DL5BA0A0G2JPC4 375 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 MYOD1P15172 320 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 GALP22466 123 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 NFYAP23511 347 aaPredicted RBP8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 GPR183P32249 361 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 TRAM1Q15629 374 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 PLET1Q6UQ28 207 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 Q6ZS49 121 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 KIR2DL5AQ8N109 375 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 KIR2DL5BQ8NHK3 375 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 CNBD2Q96M20 576 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 C5orf66Q9H5L9 145 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 SPATA2Q9UM82 520 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 OR2W1Q9Y3N9 320 aa8.59□□□□□ -1.03
CHRNA1-207ENST00000435083 FRAS1Q86XX4 4008 aa8.59□□□□□ -1.04
CHRNA1-207ENST00000435083 IGLV11-55A0A075B6I3 123 aa8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 SLC22A5O76082 557 aa8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 HLA-DQB1P01920 261 aa8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 ELLP55199 621 aaPredicted RBP8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 RPL8P62917 257 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 FABP5Q01469 135 aa8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 ZNF502Q8TBZ5 544 aa8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 SCN3BQ9NY72 215 aa8.58□□□□□ -1.04
CHRNA1-207ENST00000435083 ELF5Q9UKW6 265 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms