RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 GRPEL2Q8TAA5 225 aa14.32□□□□□ -0.12
HLA-F-220ENST00000434407 TMEM167AQ8TBQ9 72 aa14.32□□□□□ -0.12
HLA-F-220ENST00000434407 ABHD5Q8WTS1 349 aa14.32□□□□□ -0.12
HLA-F-220ENST00000434407 TMEM68Q96MH6 324 aa14.32□□□□□ -0.12
HLA-F-220ENST00000434407 OR2A7Q96R45 310 aa14.32□□□□□ -0.12
HLA-F-220ENST00000434407 AIFM2Q9BRQ8 373 aa14.32□□□□□ -0.12
HLA-F-220ENST00000434407 BET1LQ9NYM9 111 aa14.32□□□□□ -0.12
HLA-F-220ENST00000434407 A0A1W2PN81 502 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 PF4V1P10720 104 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 CHRNA7P36544 502 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 RND3P61587 244 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 GNB1P62873 340 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 ZNF79Q15937 498 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 ZNF585BQ52M93 769 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 PHLDA2Q53GA4 152 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 ASPHD1Q5U4P2 390 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 CADM3Q8N126 398 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 ZNF491Q8N8L2 437 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 POC5Q8NA72 575 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 OR4C16Q8NGL9 310 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 OR6Q1Q8NGQ2 317 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 MRGPRFQ96AM1 343 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 ZNF486Q96H40 463 aaPredicted RBP14.31□□□□□ -0.12
HLA-F-220ENST00000434407 COMMD9Q9P000 198 aa14.31□□□□□ -0.12
HLA-F-220ENST00000434407 MEGF8Q7Z7M0 2845 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 S1PR2O95136 353 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 BRI3O95415 125 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 FGF2P09038 288 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 AKAIN1P0CW23 69 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 NQO2P16083 231 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 S100GP29377 79 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 MAS1LP35410 378 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 TNXAQ16473 311 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 TMEM65Q6PI78 240 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 LINC00299Q6ZSB3 139 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 C8orf86Q6ZUL3 223 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 KLHL30-AS1Q8NEE0 82 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 OR4A5Q8NH83 315 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 SRSF12Q8WXF0 261 aaKnown RBP14.3□□□□□ -0.12
HLA-F-220ENST00000434407 UBE2E2Q96LR5 201 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 SLC2A9Q9NRM0 540 aa14.3□□□□□ -0.12
HLA-F-220ENST00000434407 MSGN1A6NI15 193 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 H3BUA1 57 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 RUNX1Q01196 453 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 OR4A47Q6IF82 309 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 FAAP20Q6NZ36 180 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 TBC1D26Q86UD7 250 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 C4orf3Q8WVX3 66 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 TRIM63Q969Q1 353 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 P2RX4Q99571 388 aa14.29□□□□□ -0.12
HLA-F-220ENST00000434407 THAP7Q9BT49 309 aaPredicted RBP14.29□□□□□ -0.12
HLA-F-220ENST00000434407 NUDT19A8MXV4 375 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 DISC1C4P0D8 188 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 I3L521 148 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 MYCNOSP40205 109 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 SSX9Q7RTT3 188 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 ZFAND1Q8TCF1 268 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 DNAH3Q8TD57 4116 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 RAX2Q96IS3 184 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 SLC2A8Q9NY64 477 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 VSIG4Q9Y279 399 aa14.28□□□□□ -0.12
HLA-F-220ENST00000434407 MPPED1O15442 326 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 ACTL6BO94805 426 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 PGAM2P15259 253 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 ECI1P42126 302 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 LPAR6P43657 344 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 RPL8P62917 257 aaKnown RBP14.27□□□□□ -0.13
HLA-F-220ENST00000434407 SURF2Q15527 256 aaPredicted RBP14.27□□□□□ -0.13
HLA-F-220ENST00000434407 SCGB2B2Q4G0G5 96 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 PYDC2Q56P42 97 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 SPANXN2Q5MJ10 180 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 C10orf55Q5SWW7 151 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 Q8N402 240 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 LINC00482Q8N8I6 264 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 OR13C8Q8NGS7 320 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 SPIN2AQ99865 258 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 SPIN2BQ9BPZ2 258 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 SLA2Q9H6Q3 261 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 GNB4Q9HAV0 340 aa14.27□□□□□ -0.13
HLA-F-220ENST00000434407 A0A1B0GW64 132 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 MARCH11A6NNE9 402 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 TEX22C9J3V5 150 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 E7EUB6 86 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 UPK2O00526 184 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 PF4P02776 101 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 CTSDP07339 412 aaPredicted RBP14.26□□□□□ -0.13
HLA-F-220ENST00000434407 PI3P19957 117 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 PPP5CP53041 499 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 PIGPP57054 158 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 KLF9Q13886 244 aaPredicted RBP14.26□□□□□ -0.13
HLA-F-220ENST00000434407 MRPL41Q8IXM3 137 aaKnown RBP14.26□□□□□ -0.13
HLA-F-220ENST00000434407 ADAD2Q8NCV1 583 aaKnown RBP14.26□□□□□ -0.13
HLA-F-220ENST00000434407 OR5T1Q8NG75 326 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 MARCH1Q8TCQ1 289 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 CASTOR1Q8WTX7 329 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 PRRT1Q99946 306 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 SRRQ9GZT4 340 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 TMEM140Q9NV12 185 aa14.26□□□□□ -0.13
HLA-F-220ENST00000434407 TRAV3A0A0B4J244 114 aa14.25□□□□□ -0.13
HLA-F-220ENST00000434407 CCL24O00175 119 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms