RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 CSPG4Q6UVK1 2322 aa12.36□□□□□ -0.43
RBM39-213ENST00000433027 MPTX1A8MV57 137 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 UPK2O00526 184 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 SAA1P0DJI8 122 aaPredicted RBP12.35□□□□□ -0.43
RBM39-213ENST00000433027 ATP5IP56385 69 aaPredicted RBP12.35□□□□□ -0.43
RBM39-213ENST00000433027 SPCS3P61009 180 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 RELBQ01201 579 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 PRB3Q04118 309 aaPredicted RBP12.35□□□□□ -0.43
RBM39-213ENST00000433027 LRRC75BQ2VPJ9 315 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 C11orf87Q6NUJ2 197 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 PRSS54Q6PEW0 395 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 MRPL41Q8IXM3 137 aaKnown RBP12.35□□□□□ -0.43
RBM39-213ENST00000433027 OR5R1Q8NH85 324 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 EAF1Q96JC9 268 aaPredicted RBP12.35□□□□□ -0.43
RBM39-213ENST00000433027 NAV3Q8IVL0 2385 aa12.35□□□□□ -0.43
RBM39-213ENST00000433027 FLNAP21333 2647 aaKnown RBP12.34□□□□□ -0.43
RBM39-213ENST00000433027 A0A0G2JRQ6 117 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 A0A1W2PRD5 423 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 A0A1W2PRF3 423 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 A0A1W2PRM7 423 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 SRRM4A7MD48 611 aaKnown RBP12.34□□□□□ -0.43
RBM39-213ENST00000433027 E5RGE8 158 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 INS-IGF2F8WCM5 200 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 M0QZK8 103 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 WRBO00258 174 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 SMAD7O15105 426 aaKnown RBP12.34□□□□□ -0.43
RBM39-213ENST00000433027 NBR2O15453 112 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 DEDDO75618 318 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 IGKV1D-33P01593 117 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 IGKV1-33P01594 117 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 CRYGBP07316 175 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 SNRNP70P08621 437 aaKnown RBP12.34□□□□□ -0.43
RBM39-213ENST00000433027 RPL8P62917 257 aaKnown RBP12.34□□□□□ -0.43
RBM39-213ENST00000433027 TNFRSF9Q07011 255 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 NOXA1Q86UR1 476 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
RBM39-213ENST00000433027 ITGB1BP2Q9UKP3 347 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
RBM39-213ENST00000433027 VPS13CQ709C8 3753 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 AKAP9Q99996 3911 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 RRHO14718 337 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 FGF16O43320 207 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 GPR137BO60478 399 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 RBMXL2O75526 392 aaKnown RBP12.33□□□□□ -0.44
RBM39-213ENST00000433027 MBPP02686 304 aaPredicted RBP12.33□□□□□ -0.44
RBM39-213ENST00000433027 HNRNPCP07910 306 aaKnown RBP eCLIP12.33□□□□□ -0.447e-7■□□□□ 9.6
RBM39-213ENST00000433027 TMEM11P17152 192 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 C4BPBP20851 252 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 HSPE1P61604 102 aaKnown RBP12.33□□□□□ -0.44
RBM39-213ENST00000433027 KRTAP1-1Q07627 177 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 RAB32Q13637 225 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 PSG5Q15238 335 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 TUSC1Q2TAM9 212 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 BRD3OSQ6XYD6 125 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 Q6ZRM9 215 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 HSD17B13Q7Z5P4 300 aaPredicted RBP12.33□□□□□ -0.44
RBM39-213ENST00000433027 DYNAPQ8N1N2 210 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 FAM71E2Q8N5Q1 922 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 CLCC1Q96S66 551 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 SIGLEC9Q9Y336 463 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
RBM39-213ENST00000433027 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 A0A0U1RQK1 487 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 K7EPK0 472 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 SYNGR2O43760 224 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 NUP62P37198 522 aaPredicted RBP12.32□□□□□ -0.44
RBM39-213ENST00000433027 RPP30P78346 268 aaKnown RBP12.32□□□□□ -0.44
RBM39-213ENST00000433027 HES1Q14469 280 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 ZNF345Q14585 488 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 MMDQ15546 238 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 RUSC1-AS1Q66K80 236 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 SSX9Q7RTT3 188 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 PPP1R27Q86WC6 154 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 TMEM86BQ8N661 226 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 OR1L8Q8NGR8 309 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 TMUB1Q9BVT8 246 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 COMMD5Q9GZQ3 224 aa12.32□□□□□ -0.44
RBM39-213ENST00000433027 A0A1W2PN81 502 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 G3V3Q6 166 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 SLC25A17O43808 307 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 TSC22D2O75157 780 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 ACTL6BO94805 426 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 OR2F2O95006 317 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 CHRNA7P36544 502 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 P2RY1P47900 373 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 PRSS8Q16651 343 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 C5orf64Q2M2E5 130 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 C17orf50Q8WW18 174 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 SMIM8Q96KF7 97 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 RBM14Q96PK6 669 aaKnown RBP12.31□□□□□ -0.44
RBM39-213ENST00000433027 SSX3Q99909 188 aa12.31□□□□□ -0.44
RBM39-213ENST00000433027 METTL1Q9UBP6 276 aaKnown RBP12.31□□□□□ -0.44
RBM39-213ENST00000433027 TRAV14DV4A0A0A6YYC5 116 aa12.3□□□□□ -0.44
RBM39-213ENST00000433027 BTBD17A6NE02 478 aa12.3□□□□□ -0.44
RBM39-213ENST00000433027 TSPAN9O75954 239 aa12.3□□□□□ -0.44
RBM39-213ENST00000433027 IFNA17P01571 189 aa12.3□□□□□ -0.44
RBM39-213ENST00000433027 COMPP49747 757 aaPredicted RBP12.3□□□□□ -0.44
RBM39-213ENST00000433027 S100A10P60903 97 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms