RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZNF83P51522 516 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 RHOAP61586 193 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 FMODQ06828 376 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 TFF3Q07654 80 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 PYCR3Q53H96 274 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 BRMS1LQ5PSV4 323 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 MTERF4Q7Z6M4 381 aaKnown RBP1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 SLC13A5Q86YT5 568 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 BOD1L2Q8IYS8 172 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 LINC00304Q8N9R0 145 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 SCGB1C1Q8TD33 95 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF721Q8TF20 911 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 LRRC45Q96CN5 670 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR2V2Q96R30 315 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF251Q9BRH9 671 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 TAS2R1Q9NYW7 299 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 PUS1Q9Y606 427 aaKnown RBP eCLIP1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 MXRA5Q9NR99 2828 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 DIDO1Q9BTC0 2240 aaKnown RBP1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 KIAA1549LQ6ZVL6 1849 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 MYO16Q9Y6X6 1858 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGKV1D-17A0A075B6S4 117 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGHV3OR15-7A0A075B7D8 119 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 A0A0D9SEW6 157 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 C15orf65H3BRN8 121 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 UBFD1O14562 309 aaKnown RBP1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 TOR1AO14656 332 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 KLRC4O43908 158 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 SNAP29O95721 258 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 LTAP01374 205 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGKV1-17P01599 117 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGHV3-53P01767 116 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 SERPINA7P05543 415 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 PAEPP09466 180 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 GABRA1P14867 456 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 KRTAP5-9P26371 169 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 PYCR1P32322 319 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 CAPZBP47756 277 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 INPP1P49441 399 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 RAB8AP61006 207 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 GNA12Q03113 381 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 IHHQ14623 411 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZCWPW2Q504Y3 356 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 TTMPQ5BVD1 217 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 PDZD11Q5EBL8 140 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 NXNL2Q5VZ03 156 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 ELP2Q6IA86 826 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 OOSP2Q86WS3 158 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 KRTCAP2Q8N6L1 136 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR5AK3PQ8NH89 298 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 CASTOR1Q8WTX7 329 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 TWIST2Q8WVJ9 160 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 PATE1Q8WXA2 126 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 RNASE6Q93091 150 aaKnown RBP1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 CMBLQ96DG6 245 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 REEP6Q96HR9 211 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 C8orf76Q96K31 380 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 TMEM56Q96MV1 263 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 CCL19Q99731 98 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 ANAPC13Q9BS18 74 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 REG4Q9BYZ8 158 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 CISHQ9NSE2 258 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 POMPQ9Y244 141 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF469Q96JG9 3925 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 UNC13CQ8NB66 2214 aa1.55□□□□□ -2.16
HMGB1P27-201ENST00000431429 FLNAP21333 2647 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 OBSCNQ5VST9 7968 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 NSD1Q96L73 2696 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 MYOFQ9NZM1 2061 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 RP1P56715 2156 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGKV1D-37A0A075B6S9 117 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 LEUTXA8MZ59 168 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 F5H5K5 113 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 H3BMM0 161 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 GOLGA8RI6L899 631 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 RGS5O15539 181 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR2B3O76000 313 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 CPSF4O95639 269 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 HLA-DRAP01903 254 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 STATHP02808 62 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF3P17036 446 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 EVI2BP34910 448 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 RPL14P50914 215 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 DLX6P56179 175 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 UBE2IP63279 158 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 DHRS2Q13268 280 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 PAFAH1B3Q15102 231 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 SLC9A3R2Q15599 337 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNHIT3Q15649 155 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 KRTAP25-1Q3LHN0 102 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 SYPL2Q5VXT5 272 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF660Q6AZW8 331 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 AMMECR1LQ6DCA0 310 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 LAIR2Q6ISS4 152 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 FAM45BPQ6NSW5 357 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 Q6ZQT7 251 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 VN1R4Q7Z5H5 301 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 CRLF3Q8IUI8 442 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 Q8NAQ8 132 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR11G2Q8NGC1 345 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms