RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ARPC1AQ92747 370 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 SLC25A21Q9BQT8 299 aaPredicted RBP17.54■□□□□ 0.4
PTPN18-205ENST00000428843 C7orf50Q9BRJ6 194 aaKnown RBP17.54■□□□□ 0.4
PTPN18-205ENST00000428843 FAM103A1Q9BTL3 118 aaKnown RBP17.54■□□□□ 0.4
PTPN18-205ENST00000428843 GON7Q9BXV9 100 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 BET1LQ9NYM9 111 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 TNCP24821 2201 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 TEX13DA0A0J9YY54 714 aaPredicted RBP17.53■□□□□ 0.4
PTPN18-205ENST00000428843 CRYM-AS1A6NIL9 109 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 CENPXA8MT69 81 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 PLA2G10O15496 165 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 CREBL2O60519 120 aaPredicted RBP17.53■□□□□ 0.4
PTPN18-205ENST00000428843 SERPINE2P07093 398 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 CCR6P51684 374 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 ERVK-16P61578 105 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 SLC35B1P78383 322 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 SP6Q3SY56 376 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 MMD2Q8IY49 270 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 SGMS2Q8NHU3 365 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 GRPEL2Q8TAA5 225 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 TMEM230Q96A57 120 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 NAA60Q9H7X0 242 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 TMEM140Q9NV12 185 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 NUBP2Q9Y5Y2 271 aa17.53■□□□□ 0.4
PTPN18-205ENST00000428843 TRAV41A0A0B4J266 112 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 MARCH11A6NNE9 402 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 KRASP01116 189 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 IGKV1-39P01597 117 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 IGKV1D-39P04432 117 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 BTCP35070 178 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 G6PCP35575 357 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 CFHR3Q02985 330 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 ECSCRQ19T08 205 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 TCTEX1D4Q5JR98 221 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 OR4X2Q8NGF9 303 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 OR4A5Q8NH83 315 aa17.52■□□□□ 0.4
PTPN18-205ENST00000428843 IL6RP08887 468 aaPredicted RBP17.51■□□□□ 0.39
PTPN18-205ENST00000428843 OR5AC1P0C628 307 aa17.51■□□□□ 0.39
PTPN18-205ENST00000428843 RBMS2Q15434 407 aaKnown RBP17.51■□□□□ 0.39
PTPN18-205ENST00000428843 C19orf54Q5BKX5 351 aa17.51■□□□□ 0.39
PTPN18-205ENST00000428843 TET2Q6N021 2002 aaPredicted RBP17.51■□□□□ 0.39
PTPN18-205ENST00000428843 ANK2Q01484 3957 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 TRAV3A0A0B4J244 114 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 UPK2O00526 184 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 LYRM1O43325 122 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 B3GALNT1O75752 331 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 ACTL6BO94805 426 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 AKR1C4P17516 323 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 UCP1P25874 307 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 PPIFP30405 207 aaKnown RBP17.5■□□□□ 0.39
PTPN18-205ENST00000428843 TMEM267Q0VDI3 215 aaPredicted RBP17.5■□□□□ 0.39
PTPN18-205ENST00000428843 C10orf55Q5SWW7 151 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 UNQ5815/PRO19632Q6UWF5 114 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 TMED4Q7Z7H5 227 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 LFNGQ8NES3 379 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 SEC22AQ96IW7 307 aa17.5■□□□□ 0.39
PTPN18-205ENST00000428843 CITED2Q99967 270 aaPredicted RBP17.5■□□□□ 0.39
PTPN18-205ENST00000428843 UPK1BO75841 260 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 NDUFB6O95139 128 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 IGHG4P01861 327 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 MAS1LP35410 378 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 RPL8P62917 257 aaKnown RBP17.49■□□□□ 0.39
PTPN18-205ENST00000428843 CD83Q01151 205 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 TRIM16LQ309B1 348 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 AKIRIN2Q53H80 203 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 TEX38Q6PEX7 206 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 SGPP2Q8IWX5 399 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 COMMD1Q8N668 190 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 MINDY2Q8NBR6 621 aa17.49■□□□□ 0.39
PTPN18-205ENST00000428843 SRSF12Q8WXF0 261 aaKnown RBP17.49■□□□□ 0.39
PTPN18-205ENST00000428843 MSGN1A6NI15 193 aa17.48■□□□□ 0.39
PTPN18-205ENST00000428843 HLA-GP17693 338 aa17.48■□□□□ 0.39
PTPN18-205ENST00000428843 CADM3Q8N126 398 aa17.48■□□□□ 0.39
PTPN18-205ENST00000428843 GLYATL2Q8WU03 294 aa17.48■□□□□ 0.39
PTPN18-205ENST00000428843 TMEM222Q9H0R3 208 aa17.48■□□□□ 0.39
PTPN18-205ENST00000428843 A0A1W2PN81 502 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 TCRBV4S1A1TA0A5B7 111 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 OR9G9P0C7N8 305 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 MYOD1P15172 320 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 CHRNA7P36544 502 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 RPL27AP46776 148 aaKnown RBP17.47■□□□□ 0.39
PTPN18-205ENST00000428843 SUPT4H1P63272 117 aaKnown RBP17.47■□□□□ 0.39
PTPN18-205ENST00000428843 DHODHQ02127 395 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 FOXE3Q13461 319 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 ASPHD1Q5U4P2 390 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 GALNT14Q96FL9 552 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 PHB2Q99623 299 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 TBC1D24Q9ULP9 559 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 FOXA2Q9Y261 457 aaPredicted RBP17.47■□□□□ 0.39
PTPN18-205ENST00000428843 KCNIP3Q9Y2W7 256 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 DNHD1Q96M86 4753 aa17.47■□□□□ 0.39
PTPN18-205ENST00000428843 SOX15O60248 233 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 IGKV1-5P01602 117 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 ELANEP08246 267 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 IFITM3Q01628 133 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 TMEM187Q14656 261 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 LCNL1Q6ZST4 164 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 H2BFWTQ7Z2G1 175 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 NDUFA11Q86Y39 141 aa17.46■□□□□ 0.39
PTPN18-205ENST00000428843 CENPSQ8N2Z9 138 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms