RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ERVFC1-1P60608 527 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 ERVK11-1P61568 191 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 SSX1Q16384 188 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 DTX2Q86UW9 622 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 U3KQ87 197 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 KIF26BQ2KJY2 2108 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 TCRBV5S2A0A599 114 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 KRBOX1C9JBD0 128 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 MPDU1O75352 247 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 IGHV3-23P01764 117 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 TAGLN2P37802 199 aaKnown RBP6.07□□□□□ -1.44
CNOT4-206ENST00000428680 CDC34P49427 236 aaPredicted RBP6.07□□□□□ -1.44
CNOT4-206ENST00000428680 B2MP61769 119 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 MINOS1Q5TGZ0 78 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 SLC35E4Q6ICL7 350 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 C1QL2Q7Z5L3 287 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 POC1AQ8NBT0 407 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 CLDND2Q8NHS1 167 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 DUSP21Q9H596 190 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 MINOS1-NBL1R4GNA1 71 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 V9GYS6 101 aa6.07□□□□□ -1.44
CNOT4-206ENST00000428680 ZNF292O60281 2723 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 TRAV41A0A0B4J266 112 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 CTAG2O75638 210 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 IL4P05112 153 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 VSIG8P0DPA2 414 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 MMP15P51511 669 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 HSPE1P61604 102 aaKnown RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 SPCS2Q15005 226 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 PSG5Q15238 335 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 HAGHQ16775 308 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 LRP11Q86VZ4 500 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 OSR1Q8TAX0 266 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 RGP1Q92546 391 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 YIPF5Q969M3 257 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 ZNF486Q96H40 463 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 KCNE5Q9UJ90 142 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 FOXA2Q9Y261 457 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 S4R3C0 116 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 RAG2P55895 527 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 UBE2MP61081 183 aaKnown RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 FA2HQ7L5A8 372 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 RPRMLQ8N4K4 120 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 OR5AU1Q8NGC0 362 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 GPX7Q96SL4 187 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 SMIM7Q9BQ49 75 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 PRDM13Q9H4Q3 707 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 RPUSD1Q9UJJ7 312 aaKnown RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 KCNK7Q9Y2U2 307 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 TMSB15BA0A087X1C1 80 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 OOSP1A8MZH6 123 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 H0YL77 283 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 ZNF701M0R085 212 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 KLF4O43474 513 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 CTSDP07339 412 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 LINC00869P0C866 280 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 CD1BP29016 333 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 ADIPOQQ15848 244 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 Q6ZN92 141 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 LYSMD2Q8IV50 215 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 GVQW1Q8N7I0 195 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 ZNF837Q96EG3 531 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 PRSS27Q9BQR3 290 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 MIEN1Q9BRT3 115 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 FAM103A1Q9BTL3 118 aaKnown RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 TMEM140Q9NV12 185 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 FN1P02751 2386 aaKnown RBP6.06□□□□□ -1.44
CNOT4-206ENST00000428680 MSGN1A6NI15 193 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 IGHMP01871 453 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 GABRB1P18505 474 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 WNT5AP41221 380 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 SPCS3P61009 180 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 TMEM249Q2WGJ8 235 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 TMEM155Q4W5P6 130 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 ZNF485Q8NCK3 441 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 OR5C1Q8NGR4 320 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 TMEM167AQ8TBQ9 72 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 SLC2A9Q9NRM0 540 aa6.06□□□□□ -1.44
CNOT4-206ENST00000428680 IGHV3OR16-8A0A075B7F1 116 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 PGPA6NDG6 321 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 ZNF705GA8MUZ8 300 aaPredicted RBP6.05□□□□□ -1.44
CNOT4-206ENST00000428680 TMEM178BH3BS89 294 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 SNRPCP09234 159 aaKnown RBP6.05□□□□□ -1.44
CNOT4-206ENST00000428680 COL8A2P25067 703 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 OR10J1P30954 320 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 RAB5BP61020 215 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 RANP62826 216 aaKnown RBP6.05□□□□□ -1.44
CNOT4-206ENST00000428680 RHOGP84095 191 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 PJVKQ0ZLH3 352 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 USF2Q15853 346 aaPredicted RBP6.05□□□□□ -1.44
CNOT4-206ENST00000428680 ASPHD2Q6ICH7 369 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 SMIM4Q8WVI0 70 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 PHLDA3Q9Y5J5 127 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 ARPC4-TTLL3A0A0A6YYG9 625 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 IGHV3-66A0A0C4DH42 116 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 IGF2P01344 180 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 PTHLHP12272 177 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 PAX1P15863 534 aa6.05□□□□□ -1.44
CNOT4-206ENST00000428680 POLR2GP62487 172 aaKnown RBP eCLIP6.05□□□□□ -1.44
CNOT4-206ENST00000428680 NRARPQ7Z6K4 114 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms