RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 ZNF57Q68EA5 555 aaPredicted RBP18.42■□□□□ 0.54
GLI3-202ENST00000428534 FAAP20Q6NZ36 180 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 TMEM65Q6PI78 240 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 OR4F17Q8NGA8 305 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 OR13C8Q8NGS7 320 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 TMEM167AQ8TBQ9 72 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 OR4F4Q96R69 305 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 TPSG1Q9NRR2 321 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 PTTG2Q9NZH5 202 aa18.42■□□□□ 0.54
GLI3-202ENST00000428534 CMYA5Q8N3K9 4069 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 ATG12O94817 140 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 PPIFP30405 207 aaKnown RBP18.41■□□□□ 0.54
GLI3-202ENST00000428534 LPAR6P43657 344 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 TNXAQ16473 311 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 RNF152Q8N8N0 203 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 MINDY2Q8NBR6 621 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 DMBX1Q8NFW5 382 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 OR5M8Q8NGP6 311 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 MARCH1Q8TCQ1 289 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 HRASLSQ9HDD0 168 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 FOXA2Q9Y261 457 aaPredicted RBP18.41■□□□□ 0.54
GLI3-202ENST00000428534 WSB1Q9Y6I7 421 aa18.41■□□□□ 0.54
GLI3-202ENST00000428534 NAP1L6A6NFF2 107 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 SERPINE2P07093 398 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 NDPQ00604 133 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 ECSCRQ19T08 205 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 UNQ5815/PRO19632Q6UWF5 114 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 GRPEL2Q8TAA5 225 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 R3HDM4Q96D70 268 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 PHB2Q99623 299 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 SPIN2AQ99865 258 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 SPIN2BQ9BPZ2 258 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 ZNF430Q9H8G1 570 aaPredicted RBP18.4■□□□□ 0.54
GLI3-202ENST00000428534 GPR132Q9UNW8 380 aa18.4■□□□□ 0.54
GLI3-202ENST00000428534 CENPXA8MT69 81 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 H0Y980 276 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 S1PR2O95136 353 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 PJVKQ0ZLH3 352 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 NSUN5P1Q3KNT7 163 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 KHDC1LQ5JSQ8 128 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 OR4A47Q6IF82 309 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 SSX9Q7RTT3 188 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 VKORC1L1Q8N0U8 176 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 LFNGQ8NES3 379 aa18.39■□□□□ 0.53
GLI3-202ENST00000428534 SLC25A21Q9BQT8 299 aaPredicted RBP18.39■□□□□ 0.53
GLI3-202ENST00000428534 C7orf50Q9BRJ6 194 aaKnown RBP18.39■□□□□ 0.53
GLI3-202ENST00000428534 C3orf85A0A1B0GTC6 90 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 A0A1W2PN81 502 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 MARCH11A6NNE9 402 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 G3V318 75 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 ARPC1BO15143 372 aaKnown RBP18.38■□□□□ 0.53
GLI3-202ENST00000428534 IGLV1-40P01703 118 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 EGR2P11161 476 aaPredicted RBP18.38■□□□□ 0.53
GLI3-202ENST00000428534 PSMB8P28062 276 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 CHRNA7P36544 502 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 RPL8P62917 257 aaKnown RBP18.38■□□□□ 0.53
GLI3-202ENST00000428534 TCTEX1D4Q5JR98 221 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 C10orf99Q6UWK7 81 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 SRSF12Q8WXF0 261 aaKnown RBP18.38■□□□□ 0.53
GLI3-202ENST00000428534 TSC22D3Q99576 134 aa18.38■□□□□ 0.53
GLI3-202ENST00000428534 TET2Q6N021 2002 aaPredicted RBP18.38■□□□□ 0.53
GLI3-202ENST00000428534 H3BUA1 57 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 PI3P19957 117 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 RPL23AP62750 156 aaKnown RBP18.37■□□□□ 0.53
GLI3-202ENST00000428534 ZNF585BQ52M93 769 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 C19orf54Q5BKX5 351 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 FAM103A1Q9BTL3 118 aaKnown RBP18.37■□□□□ 0.53
GLI3-202ENST00000428534 SLA2Q9H6Q3 261 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 TMEM140Q9NV12 185 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 KCNIP3Q9Y2W7 256 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 FBXO7Q9Y3I1 522 aa18.37■□□□□ 0.53
GLI3-202ENST00000428534 PIGBOS1A0A0B4J2F0 54 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 TEX13DA0A0J9YY54 714 aaPredicted RBP18.36■□□□□ 0.53
GLI3-202ENST00000428534 SNAPC5O75971 98 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 CDX1P47902 265 aaPredicted RBP18.36■□□□□ 0.53
GLI3-202ENST00000428534 BAK1Q16611 211 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 MRGPRG-AS1Q2M3A8 158 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 SLC25A42Q86VD7 318 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 SGPP2Q8IWX5 399 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 MRGPRFQ96AM1 343 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 RTBDNQ9BSG5 229 aaPredicted RBP18.36■□□□□ 0.53
GLI3-202ENST00000428534 CCDC32Q9BV29 185 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 C5orf66Q9H5L9 145 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 FKBP11Q9NYL4 201 aa18.36■□□□□ 0.53
GLI3-202ENST00000428534 MSGN1A6NI15 193 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 UPK2O00526 184 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 KRASP01116 189 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 IL6RP08887 468 aaPredicted RBP18.35■□□□□ 0.53
GLI3-202ENST00000428534 PF4V1P10720 104 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 HLA-GP17693 338 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 RPL27AP46776 148 aaKnown RBP18.35■□□□□ 0.53
GLI3-202ENST00000428534 SSBP2P81877 361 aaPredicted RBP18.35■□□□□ 0.53
GLI3-202ENST00000428534 DHODHQ02127 395 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 THOC7Q6I9Y2 204 aaKnown RBP18.35■□□□□ 0.53
GLI3-202ENST00000428534 COMMD5Q9GZQ3 224 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 AKIP1Q9NQ31 210 aa18.35■□□□□ 0.53
GLI3-202ENST00000428534 TGP01266 2768 aa18.34■□□□□ 0.53
GLI3-202ENST00000428534 BRI3O95415 125 aa18.34■□□□□ 0.53
GLI3-202ENST00000428534 RAB9AP51151 201 aa18.34■□□□□ 0.53
GLI3-202ENST00000428534 UBE2E2Q96LR5 201 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms