RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 J3QR06 171 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 DNASE2O00115 360 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-210ENST00000428307 OR13C7P0DN81 318 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 FGF7P21781 194 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 AARDQ4LEZ3 155 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 ZNF833PQ6ZTB9 187 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 ZNF429Q86V71 674 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 C11orf42Q8N5U0 333 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 LFNGQ8NES3 379 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 AKAP6Q13023 2319 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 HCFC1P51610 2035 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 RBFOX3A6NFN3 312 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 OR8U8P0C7N1 319 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 IGHV1-8P0DP01 117 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 VDAC2P45880 294 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-210ENST00000428307 CEBPGP53567 150 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 FGF8P55075 233 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-210ENST00000428307 DLX6P56179 175 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 GNB2P62879 340 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 SERF2P84101 59 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 ATP6V1FQ16864 119 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 ZNF841Q6ZN19 808 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 ETV3LQ6ZN32 361 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 OR52E5Q8NH55 327 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 RAB39BQ96DA2 213 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 PSMG3Q9BT73 122 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-210ENST00000428307 RAB1BQ9H0U4 201 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 CBLN4Q9NTU7 201 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 SMCO3A2RU48 225 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 HMGB3O15347 200 aaKnown RBP8.48□□□□□ -1.05
HDAC9-210ENST00000428307 SNAPINO95295 136 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 IFNA4P05014 189 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 PPOXP50336 477 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 HSPE1P61604 102 aaKnown RBP8.48□□□□□ -1.05
HDAC9-210ENST00000428307 ZNF726P1Q15940 193 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 SSX7Q7RTT5 188 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 CBLN2Q8IUK8 224 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 AIFM2Q9BRQ8 373 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 TMEM14BQ9NUH8 114 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
HDAC9-210ENST00000428307 TNCP24821 2201 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 H0YJW9 148 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 IGKV1D-33P01593 117 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 IGKV1-33P01594 117 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 IGHV2-70P01814 119 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 FBP1P09467 338 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 RAB2AP61019 212 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 RPP25LQ8N5L8 163 aaKnown RBP8.47□□□□□ -1.05
HDAC9-210ENST00000428307 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 RCC1LQ96I51 464 aaKnown RBP8.47□□□□□ -1.05
HDAC9-210ENST00000428307 SLC35B3Q9H1N7 401 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 KIAA1456Q9P272 454 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 GNG13Q9P2W3 67 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 OR51B2Q9Y5P1 312 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 APOA2P02652 100 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 ARG1P05089 322 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 SAA1P0DJI8 122 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-210ENST00000428307 DEFA4P12838 97 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 CD1BP29016 333 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 AKR1C3P42330 323 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 RPP30P78346 268 aaKnown RBP8.47□□□□□ -1.05
HDAC9-210ENST00000428307 ACSM6Q6P461 480 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 DPPA3Q6W0C5 159 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 OR5AN1Q8NGI8 311 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 OR9G1Q8NH87 305 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 LHX4Q969G2 390 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 HARBI1Q96MB7 349 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 C20orf24Q9BUV8 137 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 NPCDR1Q9BY65 106 aa8.47□□□□□ -1.05
HDAC9-210ENST00000428307 FOXA2Q9Y261 457 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-210ENST00000428307 TRBV23-1A0A0A0MS06 115 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 IGHV3-72A0A0B4J1Y9 119 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 PPIAL4CA0A0B4J2A2 164 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 BTBD17A6NE02 478 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 ZFP92A6NM28 416 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 PPIAL4GP0DN37 164 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 POU2AF1Q16633 256 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 PDLIM3Q53GG5 364 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-210ENST00000428307 TMEM41BQ5BJD5 291 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 SP5Q6BEB4 398 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-210ENST00000428307 ZNF709Q8N972 641 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 RXFP4Q8TDU9 374 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 TMEM186Q96B77 213 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 FLYWCH2Q96CP2 140 aaKnown RBP8.46□□□□□ -1.06
HDAC9-210ENST00000428307 PARD6GQ9BYG4 376 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-210ENST00000428307 TMEM133Q9H2Q1 129 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 ENY2Q9NPA8 101 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 UPK2O00526 184 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 HBE1P02100 147 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 FFAR4Q5NUL3 377 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 ZNF787Q6DD87 383 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-210ENST00000428307 C11orf71Q6IPW1 123 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 TGIF2LXQ8IUE1 241 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 CLRN3Q8NCR9 226 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 CLDND2Q8NHS1 167 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 ITLN2Q8WWU7 325 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-210ENST00000428307 ST6GALNAC6Q969X2 333 aa8.46□□□□□ -1.06
HDAC9-210ENST00000428307 NABP2Q9BQ15 211 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms