RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CD40LGP29965 261 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 RAB25P57735 213 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 TSPAN5P62079 268 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 POU2AF1Q16633 256 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 AADACL3Q5VUY0 350 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 SSX9Q7RTT3 188 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 VSTM2AQ8TAG5 236 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 NXF2Q9GZY0 626 aaKnown RBP12.91□□□□□ -0.34
VRK2-204ENST00000428021 RBM38Q9H0Z9 239 aaKnown RBP12.91□□□□□ -0.34
VRK2-204ENST00000428021 PLEKHA2Q9HB19 425 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 A0A1B0GW64 132 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 GABARAPH6UMI1 98 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 RBMXL2O75526 392 aaKnown RBP12.9□□□□□ -0.34
VRK2-204ENST00000428021 S1PR2O95136 353 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 IGHV3-11P01762 117 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 CD3DP04234 171 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 UCP3P55916 312 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 TAS2R31P59538 309 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 KRTAP10-11P60412 298 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 ZNF616Q08AN1 781 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 OR4A47Q6IF82 309 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 ADAD2Q8NCV1 583 aaKnown RBP12.9□□□□□ -0.34
VRK2-204ENST00000428021 CD300LFQ8TDQ1 290 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 FCAMRQ8WWV6 532 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 DIRAS2Q96HU8 199 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 PHB2Q99623 299 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
VRK2-204ENST00000428021 RSRP1Q9BUV0 290 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 ZNF355PQ9NSJ1 428 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 BET1LQ9NYM9 111 aa12.9□□□□□ -0.34
VRK2-204ENST00000428021 TEX22C9J3V5 150 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 ACTL6BO94805 426 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 CD74P04233 296 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 OR9G9P0C7N8 305 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 F2RP25116 425 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
VRK2-204ENST00000428021 MAS1LP35410 378 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 ZNF585BQ52M93 769 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 PHLDA2Q53GA4 152 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
VRK2-204ENST00000428021 LHFPL1Q86WI0 220 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 CMTM1Q8IZ96 169 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 DGCR14Q96DF8 476 aaKnown RBP12.89□□□□□ -0.35
VRK2-204ENST00000428021 SPIN2AQ99865 258 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 SPIN2BQ9BPZ2 258 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 SOSTQ9BQB4 213 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 AIFM2Q9BRQ8 373 aa12.89□□□□□ -0.35
VRK2-204ENST00000428021 C6orf62Q9GZU0 229 aaPredicted RBP12.89□□□□□ -0.35
VRK2-204ENST00000428021 AURKAIP1Q9NWT8 199 aaPredicted RBP12.89□□□□□ -0.35
VRK2-204ENST00000428021 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 A0A087WW49 117 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 HMX3A6NHT5 357 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 CTDSPLO15194 276 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 OR8U8P0C7N1 319 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 MYOD1P15172 320 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 NQO2P16083 231 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 TBPP20226 339 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 RPL8P62917 257 aaKnown RBP12.88□□□□□ -0.35
VRK2-204ENST00000428021 MRPS10P82664 201 aaKnown RBP12.88□□□□□ -0.35
VRK2-204ENST00000428021 LPCAT3Q6P1A2 487 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 TTC9CQ8N5M4 171 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 OR4A5Q8NH83 315 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 SMIM4Q8WVI0 70 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 GPR61Q9BZJ8 451 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 COA4Q9NYJ1 87 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 COMMD9Q9P000 198 aa12.88□□□□□ -0.35
VRK2-204ENST00000428021 CGB1A6NKQ9 187 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 LINC01619G3V211 115 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 UPK2O00526 184 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 HSPB1P04792 205 aaKnown RBP12.87□□□□□ -0.35
VRK2-204ENST00000428021 IFNA6P05013 189 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 ZNF735P0CB33 412 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 HLA-GP17693 338 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 TNFSF8P32971 234 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 LPAR6P43657 344 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
VRK2-204ENST00000428021 DEFA5Q01523 94 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 ZNF45Q02386 682 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 SSBP1Q04837 148 aaKnown RBP12.87□□□□□ -0.35
VRK2-204ENST00000428021 IL18Q14116 193 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 REC114Q7Z4M0 266 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 ARRDC1Q8N5I2 433 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 MCFD2Q8NI22 146 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 DCUN1D4Q92564 292 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 DPF1Q92782 380 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 HRASLSQ9HDD0 168 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 TMEM140Q9NV12 185 aa12.87□□□□□ -0.35
VRK2-204ENST00000428021 A0A0G2JLM5 398 aa12.86□□□□□ -0.35
VRK2-204ENST00000428021 C13orf42A0A1B0GVH6 325 aa12.86□□□□□ -0.35
VRK2-204ENST00000428021 CCDC160A6NGH7 325 aa12.86□□□□□ -0.35
VRK2-204ENST00000428021 MPPED1O15442 326 aa12.86□□□□□ -0.35
VRK2-204ENST00000428021 RAB3DO95716 219 aa12.86□□□□□ -0.35
VRK2-204ENST00000428021 PRH1P02810 166 aa12.86□□□□□ -0.35
VRK2-204ENST00000428021 RPA2P15927 270 aa12.86□□□□□ -0.35
VRK2-204ENST00000428021 SLURP1P55000 103 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms