RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TNXAQ16473 311 aa19.67■□□□□ 0.74
HERPUD2-205ENST00000427455 UNQ5815/PRO19632Q6UWF5 114 aa19.67■□□□□ 0.74
HERPUD2-205ENST00000427455 SSX9Q7RTT3 188 aa19.67■□□□□ 0.74
HERPUD2-205ENST00000427455 TBC1D26Q86UD7 250 aa19.67■□□□□ 0.74
HERPUD2-205ENST00000427455 LFNGQ8NES3 379 aa19.67■□□□□ 0.74
HERPUD2-205ENST00000427455 TMEM167AQ8TBQ9 72 aa19.67■□□□□ 0.74
HERPUD2-205ENST00000427455 PRRT1Q99946 306 aa19.67■□□□□ 0.74
HERPUD2-205ENST00000427455 ACTL6BO94805 426 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 PF4V1P10720 104 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 AP3S2P59780 193 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 POU2AF1Q16633 256 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 LCNL1Q6ZST4 164 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 ZFAND1Q8TCF1 268 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 FAM212BQ9NTI7 297 aaPredicted RBP19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 SLC2A8Q9NY64 477 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 BET1LQ9NYM9 111 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 TNCP24821 2201 aa19.66■□□□□ 0.74
HERPUD2-205ENST00000427455 SLC6A1P30531 599 aa19.65■□□□□ 0.74
HERPUD2-205ENST00000427455 OR4A47Q6IF82 309 aa19.65■□□□□ 0.74
HERPUD2-205ENST00000427455 TMEM65Q6PI78 240 aa19.65■□□□□ 0.74
HERPUD2-205ENST00000427455 OR5M8Q8NGP6 311 aa19.65■□□□□ 0.74
HERPUD2-205ENST00000427455 OR13C8Q8NGS7 320 aa19.65■□□□□ 0.74
HERPUD2-205ENST00000427455 SRSF12Q8WXF0 261 aaKnown RBP19.65■□□□□ 0.74
HERPUD2-205ENST00000427455 MRGPRFQ96AM1 343 aa19.65■□□□□ 0.74
HERPUD2-205ENST00000427455 A6NHS1 94 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 NUDT19A8MXV4 375 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 SOX15O60248 233 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 PI3P19957 117 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 PIGPP57054 158 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 KLF9Q13886 244 aaPredicted RBP19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 SURF2Q15527 256 aaPredicted RBP19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 OR4A5Q8NH83 315 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 MARCH1Q8TCQ1 289 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 MYOZ3Q8TDC0 251 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 TMEM68Q96MH6 324 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 SRRQ9GZT4 340 aa19.64■□□□□ 0.73
HERPUD2-205ENST00000427455 MPPED1O15442 326 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 FAUP35544 74 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 LPAR6P43657 344 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 ERVK-16P61578 105 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 ZNF585BQ52M93 769 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 ZNF695Q8IW36 515 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 TOMM5Q8N4H5 51 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 CCDC71LQ8N9Z2 235 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 KLHL30-AS1Q8NEE0 82 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 DMBX1Q8NFW5 382 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 OR51S1Q8NGJ8 323 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 PHB2Q99623 299 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 KLK15Q9H2R5 256 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 HRASLSQ9HDD0 168 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 MCUBQ9NWR8 336 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 SCP2D1Q9UJQ7 156 aa19.63■□□□□ 0.73
HERPUD2-205ENST00000427455 MARCH11A6NNE9 402 aa19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 CTSDP07339 412 aaPredicted RBP19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 MAS1LP35410 378 aa19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 CDX1P47902 265 aaPredicted RBP19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 RPL8P62917 257 aaKnown RBP19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 C18orf65Q6ZTR6 163 aa19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 DEDD2Q8WXF8 326 aa19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 TMEM140Q9NV12 185 aa19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 COPZ2Q9P299 210 aa19.62■□□□□ 0.73
HERPUD2-205ENST00000427455 MSGN1A6NI15 193 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 CD40LGP29965 261 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 RAB9AP51151 201 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 C10orf55Q5SWW7 151 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 ASPHD1Q5U4P2 390 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 GDPD1Q8N9F7 314 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 SPIN2AQ99865 258 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 SPIN2BQ9BPZ2 258 aa19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 C14orf166Q9Y224 244 aaKnown RBP19.61■□□□□ 0.73
HERPUD2-205ENST00000427455 H0Y980 276 aa19.6■□□□□ 0.73
HERPUD2-205ENST00000427455 PF4P02776 101 aa19.6■□□□□ 0.73
HERPUD2-205ENST00000427455 FGF2P09038 288 aa19.6■□□□□ 0.73
HERPUD2-205ENST00000427455 C8orf86Q6ZUL3 223 aa19.6■□□□□ 0.73
HERPUD2-205ENST00000427455 UBE2E2Q96LR5 201 aa19.6■□□□□ 0.73
HERPUD2-205ENST00000427455 H3BUA1 57 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 UPK2O00526 184 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 IL6RP08887 468 aaPredicted RBP19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 HLA-GP17693 338 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 RPL27AP46776 148 aaKnown RBP19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 CNPY1Q3B7I2 92 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 CADM3Q8N126 398 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 ZNF491Q8N8L2 437 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 CASTOR1Q8WTX7 329 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 C4orf3Q8WVX3 66 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 SLA2Q9H6Q3 261 aa19.59■□□□□ 0.73
HERPUD2-205ENST00000427455 KRASP01116 189 aa19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 SERPINE2P07093 398 aa19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 APELAP0DMC3 54 aa19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 RPA2P15927 270 aa19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 KIAA0141Q14154 515 aaPredicted RBP19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 OR5T1Q8NG75 326 aa19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 C5orf66Q9H5L9 145 aa19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 VSIG4Q9Y279 399 aa19.58■□□□□ 0.72
HERPUD2-205ENST00000427455 C3orf85A0A1B0GTC6 90 aa19.57■□□□□ 0.72
HERPUD2-205ENST00000427455 B3GALNT1O75752 331 aa19.57■□□□□ 0.72
HERPUD2-205ENST00000427455 G6PCP35575 357 aa19.57■□□□□ 0.72
HERPUD2-205ENST00000427455 ZNF45Q02386 682 aa19.57■□□□□ 0.72
HERPUD2-205ENST00000427455 TRIQKQ629K1 86 aa19.57■□□□□ 0.72
HERPUD2-205ENST00000427455 ETV3LQ6ZN32 361 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms