RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CATR1Q13166 79 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 MSMO1Q15800 293 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 LPAL2Q16609 132 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 CEACAM16Q2WEN9 425 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF876PQ49A33 203 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 PHYHD1Q5SRE7 291 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 SLC25A26Q70HW3 274 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF429Q86V71 674 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF573Q86YE8 665 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 SLC25A45Q8N413 288 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 FAM24BQ8N5W8 94 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM252Q8N6L7 170 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ZFP62Q8NB50 900 aaPredicted RBP4.09□□□□□ -1.75
LINC00458-202ENST00000427299 OR56B2PQ8NGI1 322 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 OR10J5Q8NHC4 309 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 NANPQ8TBE9 248 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 PHLDA1Q8WV24 401 aaPredicted RBP4.09□□□□□ -1.75
LINC00458-202ENST00000427299 PSMF1Q92530 271 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ISOC2Q96AB3 205 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 RAB39BQ96DA2 213 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 MUCL1Q96DR8 90 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 IMMP1LQ96LU5 166 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 TAAR6Q96RI8 345 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 TP53RKQ96S44 253 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 PYGO2Q9BRQ0 406 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 SRXN1Q9BYN0 137 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 PKIBQ9C010 78 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 SH3BGRL3Q9H299 93 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 C11orf1Q9H5F2 150 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 UBE2ZQ9H832 354 aaPredicted RBP4.09□□□□□ -1.75
LINC00458-202ENST00000427299 CALHM2Q9HA72 323 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 MANBALQ9NQG1 85 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 KCNIP2Q9NS61 270 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 POLDIP2Q9Y2S7 368 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 NOSIPQ9Y314 301 aaKnown RBP4.09□□□□□ -1.75
LINC00458-202ENST00000427299 TIMM9Q9Y5J7 89 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 MPC1Q9Y5U8 109 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 PUS1Q9Y606 427 aaKnown RBP eCLIP4.09□□□□□ -1.75
LINC00458-202ENST00000427299 MED12Q93074 2177 aa4.09□□□□□ -1.76
LINC00458-202ENST00000427299 CEP290O15078 2479 aa4.09□□□□□ -1.76
LINC00458-202ENST00000427299 IGKV1-27A0A075B6S5 117 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 A0A0J9YW62 118 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 A0A0U1RRA0 63 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 NKX2-6A6NCS4 301 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF729A6NN14 1252 aaPredicted RBP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CD300LBA8K4G0 201 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF724A8MTY0 619 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CLDN34H7C241 214 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 MRPL33O75394 65 aaKnown RBP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SERPINA7P05543 415 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SRP19P09132 144 aaKnown RBP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 IGHV4-31P0DP07 118 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 NQO2P16083 231 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 F2RP25116 425 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CXCL12P48061 93 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 HCFC1P51610 2035 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 RND2P52198 227 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 OR2B8PP59922 312 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 POLR2GP62487 172 aaKnown RBP eCLIP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 GNG3P63215 75 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 PSG4Q00888 419 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 DEFA6Q01524 100 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 PRDX4Q13162 271 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CEACAM21Q3KPI0 293 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SP6Q3SY56 376 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 TMEM41BQ5BJD5 291 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 KIAA2026Q5HYC2 2103 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 TSPO2Q5TGU0 170 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 NCR3LG1Q68D85 454 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 OR4A47Q6IF82 309 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CD164L2Q6UWJ8 174 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 RBMS3Q6XE24 437 aaKnown RBP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF818PQ6ZRF7 136 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SLC16A13Q7RTY0 426 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 NUFIP2Q7Z417 695 aaKnown RBP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 MED12LQ86YW9 2145 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 TGIF2LYQ8IUE0 185 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SELENOHQ8IZQ5 122 aaKnown RBP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 GAPTQ8N292 157 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 TCTEX1D1Q8N7M0 179 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CYB561D1Q8N8Q1 229 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SUMF1Q8NBK3 374 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 OR5A2Q8NGI9 324 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 OR11L1Q8NGX0 322 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 OR10D3Q8NH80 312 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CLDND2Q8NHS1 167 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 PIGCQ92535 297 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CLDN23Q96B33 292 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 IP6K3Q96PC2 410 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 CIB3Q96Q77 187 aaPredicted RBP4.08□□□□□ -1.76
LINC00458-202ENST00000427299 OR5B12Q96R08 314 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SSX3Q99909 188 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 AGMATQ9BSE5 352 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 C20orf24Q9BUV8 137 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 TPPP3Q9BW30 176 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 RTL8AQ9BWD3 113 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 SCRT1Q9BWW7 348 aa4.08□□□□□ -1.76
LINC00458-202ENST00000427299 WFDC1Q9HC57 220 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms