RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 UXS1Q8NBZ7 420 aa9.59□□□□□ -0.87
LINC00339-203ENST00000420503 NECAP1Q8NC96 275 aa9.59□□□□□ -0.87
LINC00339-203ENST00000420503 OR10J5Q8NHC4 309 aa9.59□□□□□ -0.87
LINC00339-203ENST00000420503 FANCD2OSQ96PS1 177 aa9.59□□□□□ -0.87
LINC00339-203ENST00000420503 UBQLN2Q9UHD9 624 aa9.59□□□□□ -0.87
LINC00339-203ENST00000420503 FBXL7Q9UJT9 491 aa9.59□□□□□ -0.87
LINC00339-203ENST00000420503 RBM7Q9Y580 266 aaKnown RBP9.59□□□□□ -0.87
LINC00339-203ENST00000420503 IGKV1D-13A0A0B4J2D9 117 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 ZNF320A2RRD8 509 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 MFSD2BA6NFX1 497 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 RAB27BO00194 218 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 MFNGO00587 321 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 GGCTO75223 188 aaKnown RBP9.58□□□□□ -0.88
LINC00339-203ENST00000420503 ARL6IP5O75915 188 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 IGLV2-14P01704 120 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 IGKV1-13P0DP09 117 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 FGF9P31371 208 aaPredicted RBP9.58□□□□□ -0.88
LINC00339-203ENST00000420503 ARL3P36405 182 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 SERPINB10P48595 397 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 BRWD1-AS2P59051 145 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 CDK10Q15131 360 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 DEFB135Q30KP9 77 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 ZNF57Q68EA5 555 aaPredicted RBP9.58□□□□□ -0.88
LINC00339-203ENST00000420503 LYG2Q86SG7 212 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 OR52B4Q8NGK2 314 aa9.58□□□□□ -0.88
LINC00339-203ENST00000420503 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
LINC00339-203ENST00000420503 FYTTD1Q96QD9 318 aaKnown RBP9.58□□□□□ -0.88
LINC00339-203ENST00000420503 LOC102724200A0A096LPH7 203 aaPredicted RBP9.57□□□□□ -0.88
LINC00339-203ENST00000420503 CGB1A6NKQ9 187 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 LGALS9O00182 355 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 CALRP27797 417 aaKnown RBP9.57□□□□□ -0.88
LINC00339-203ENST00000420503 TNFRSF9Q07011 255 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 CBX3Q13185 183 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
LINC00339-203ENST00000420503 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 OR56B1Q8NGI3 324 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 RAB3CQ96E17 227 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 GINS4Q9BRT9 223 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 DCUN1D5Q9BTE7 237 aa9.57□□□□□ -0.88
LINC00339-203ENST00000420503 TECRQ9NZ01 308 aaKnown RBP9.57□□□□□ -0.88
LINC00339-203ENST00000420503 TRAV1-2A0A0B4J238 106 aa9.56□□□□□ -0.88
LINC00339-203ENST00000420503 RRASP10301 218 aa9.56□□□□□ -0.88
LINC00339-203ENST00000420503 NFYAP23511 347 aaPredicted RBP9.56□□□□□ -0.88
LINC00339-203ENST00000420503 C22orf42Q6IC83 251 aa9.56□□□□□ -0.88
LINC00339-203ENST00000420503 OSR1Q8TAX0 266 aaPredicted RBP9.56□□□□□ -0.88
LINC00339-203ENST00000420503 SPIN2AQ99865 258 aa9.56□□□□□ -0.88
LINC00339-203ENST00000420503 SPIN2BQ9BPZ2 258 aa9.56□□□□□ -0.88
LINC00339-203ENST00000420503 OR51E2Q9H255 320 aa9.56□□□□□ -0.88
LINC00339-203ENST00000420503 TXNL4BQ9NX01 149 aaKnown RBP9.56□□□□□ -0.88
LINC00339-203ENST00000420503 SMIM30A4D0T7 59 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 A8MWP6 167 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 ACTL6BO94805 426 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 HIST1H1DP16402 221 aaKnown RBP9.55□□□□□ -0.88
LINC00339-203ENST00000420503 CD36P16671 472 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 PRR20EP86478 221 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 PRR20CP86479 221 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 PRR20DP86480 221 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 PRR20BP86481 221 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 PRR20AP86496 221 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 KCTD9Q7L273 389 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 SSX9Q7RTT3 188 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 NR2C2APQ86WQ0 139 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 MMD2Q8IY49 270 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 OR10R2Q8NGX6 335 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 YIPF6Q96EC8 236 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 ZNF257Q9Y2Q1 563 aa9.55□□□□□ -0.88
LINC00339-203ENST00000420503 NUPR2A6NF83 97 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 NPIPB5A8MRT5 1133 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 KBTBD11O94819 623 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 ZNF735P0CB33 412 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 RPL35AP18077 110 aaKnown RBP9.54□□□□□ -0.88
LINC00339-203ENST00000420503 GADD45AP24522 165 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 RPL27AP46776 148 aaKnown RBP9.54□□□□□ -0.88
LINC00339-203ENST00000420503 MRPS15P82914 257 aaKnown RBP9.54□□□□□ -0.88
LINC00339-203ENST00000420503 EIF4EBP1Q13541 118 aaPredicted RBP9.54□□□□□ -0.88
LINC00339-203ENST00000420503 ZNF124Q15973 351 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 ZNF585BQ52M93 769 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 PUSL1Q8N0Z8 303 aaKnown RBP9.54□□□□□ -0.88
LINC00339-203ENST00000420503 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 VCX3AQ9NNX9 186 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 RAB22AQ9UL26 194 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 SPATA2Q9UM82 520 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 SSR3Q9UNL2 185 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 RBMX2Q9Y388 322 aaKnown RBP9.54□□□□□ -0.88
LINC00339-203ENST00000420503 V9GY05 133 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 HECTD4Q9Y4D8 3996 aa9.54□□□□□ -0.88
LINC00339-203ENST00000420503 IGLV11-55A0A075B6I3 123 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 IGHV3OR16-8A0A075B7F1 116 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 TRAV3A0A0B4J244 114 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 SPRY2O43597 315 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 CLEC3BP05452 202 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 PTHLHP12272 177 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 RPA2P15927 270 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 PSMB6P28072 239 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 FCGR2BP31994 310 aaPredicted RBP9.53□□□□□ -0.88
LINC00339-203ENST00000420503 GPR183P32249 361 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 ZNF645Q8N7E2 425 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms