RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 TMEM267Q0VDI3 215 aaPredicted RBP12.89□□□□□ -0.35
SEC22C-206ENST00000420163 DEFB136Q30KP8 78 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 SCGB2B2Q4G0G5 96 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 ZNF585BQ52M93 769 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 LPCAT3Q6P1A2 487 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 MMD2Q8IY49 270 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 TCTEX1D1Q8N7M0 179 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 OR5T1Q8NG75 326 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 OR6Q1Q8NGQ2 317 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 SRSF12Q8WXF0 261 aaKnown RBP12.89□□□□□ -0.35
SEC22C-206ENST00000420163 TRIM63Q969Q1 353 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 GNB4Q9HAV0 340 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 SLC2A9Q9NRM0 540 aa12.89□□□□□ -0.35
SEC22C-206ENST00000420163 MEGF8Q7Z7M0 2845 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 A0A1B0GW64 132 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 MSGN1A6NI15 193 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 E7EUB6 86 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 AKAIN1P0CW23 69 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 NQO2P16083 231 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 LPAR6P43657 344 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 CDX1P47902 265 aaPredicted RBP12.88□□□□□ -0.35
SEC22C-206ENST00000420163 RAB9AP51151 201 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 TAS2R31P59538 309 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 MEF2DQ14814 521 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 POU2AF1Q16633 256 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 PYDC2Q56P42 97 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 TMEM65Q6PI78 240 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 ZNF491Q8N8L2 437 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 POC5Q8NA72 575 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 OR13C8Q8NGS7 320 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 TERB2Q8NHR7 220 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 MARCH1Q8TCQ1 289 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 CD300LFQ8TDQ1 290 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 RAX2Q96IS3 184 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 THAP7Q9BT49 309 aaPredicted RBP12.88□□□□□ -0.35
SEC22C-206ENST00000420163 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
SEC22C-206ENST00000420163 DNAH3Q8TD57 4116 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 PF4P02776 101 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 IL6RP08887 468 aaPredicted RBP12.87□□□□□ -0.35
SEC22C-206ENST00000420163 ETV6P41212 452 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 DEFA5Q01523 94 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 Q8N402 240 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 OR5M8Q8NGP6 311 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 VSTM2AQ8TAG5 236 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 MS4A10Q96PG2 267 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 OR5B12Q96R08 314 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 TMEM140Q9NV12 185 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
SEC22C-206ENST00000420163 DISC1C4P0D8 188 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 TEX22C9J3V5 150 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 CREBL2O60519 120 aaPredicted RBP12.86□□□□□ -0.35
SEC22C-206ENST00000420163 PIGPP57054 158 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 RND3P61587 244 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 KLF9Q13886 244 aaPredicted RBP12.86□□□□□ -0.35
SEC22C-206ENST00000420163 C1QL4Q86Z23 238 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 LINC00482Q8N8I6 264 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 OR51S1Q8NGJ8 323 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 C4orf3Q8WVX3 66 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 ZNF486Q96H40 463 aaPredicted RBP12.86□□□□□ -0.35
SEC22C-206ENST00000420163 UBE2E2Q96LR5 201 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 P2RX4Q99571 388 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 PHB2Q99623 299 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 HRASLSQ9HDD0 168 aa12.86□□□□□ -0.35
SEC22C-206ENST00000420163 HMX3A6NHT5 357 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 CGB1A6NKQ9 187 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 G3V4G9 280 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 I3L521 148 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 UPK2O00526 184 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 MPPED1O15442 326 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 ACTL6BO94805 426 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 IGKV1-39P01597 117 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 IGKV1D-39P04432 117 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 PTBP1P26599 531 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEC22C-206ENST00000420163 SLC6A1P30531 599 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 RPL27AP46776 148 aaKnown RBP12.85□□□□□ -0.35
SEC22C-206ENST00000420163 TPPP2P59282 170 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
SEC22C-206ENST00000420163 SPANXN2Q5MJ10 180 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 C19orf35Q6ZS72 473 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 MRPL41Q8IXM3 137 aaKnown RBP12.85□□□□□ -0.35
SEC22C-206ENST00000420163 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
SEC22C-206ENST00000420163 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 SRRQ9GZT4 340 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 ALX4Q9H161 411 aaPredicted RBP12.85□□□□□ -0.35
SEC22C-206ENST00000420163 VSIG4Q9Y279 399 aa12.85□□□□□ -0.35
SEC22C-206ENST00000420163 A6NHS1 94 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 CCL24O00175 119 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 RBMXL2O75526 392 aaKnown RBP12.84□□□□□ -0.35
SEC22C-206ENST00000420163 KRASP01116 189 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 TRGV3P03979 118 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 CTSDP07339 412 aaPredicted RBP12.84□□□□□ -0.35
SEC22C-206ENST00000420163 HLA-GP17693 338 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 S100GP29377 79 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 G6PCP35575 357 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 MYCNOSP40205 109 aa12.84□□□□□ -0.35
SEC22C-206ENST00000420163 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms