RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 CLEC3BP05452 202 aa10.53□□□□□ -0.72
NFE4-201ENST00000420058 ZNF735P0CB33 412 aa10.53□□□□□ -0.72
NFE4-201ENST00000420058 SPHARQ15513 63 aa10.53□□□□□ -0.72
NFE4-201ENST00000420058 ANKRD55Q3KP44 614 aa10.53□□□□□ -0.72
NFE4-201ENST00000420058 FAM106AQ4KMX7 169 aa10.53□□□□□ -0.72
NFE4-201ENST00000420058 PHLDA1Q8WV24 401 aaPredicted RBP10.53□□□□□ -0.72
NFE4-201ENST00000420058 MFSD2BA6NFX1 497 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 RAB27BO00194 218 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 MFNGO00587 321 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 FCGR3BO75015 233 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 ACTL6BO94805 426 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 MYOD1P15172 320 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 GNB3P16520 340 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 CTRB1P17538 263 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 EIF4EBP1Q13541 118 aaPredicted RBP10.52□□□□□ -0.73
NFE4-201ENST00000420058 IRF3Q14653 427 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 LIPKQ5VXJ0 399 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 CTRB2Q6GPI1 263 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 Q6ZS49 121 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 PUSL1Q8N0Z8 303 aaKnown RBP10.52□□□□□ -0.73
NFE4-201ENST00000420058 RAB3CQ96E17 227 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 FYTTD1Q96QD9 318 aaKnown RBP10.52□□□□□ -0.73
NFE4-201ENST00000420058 MND1Q9BWT6 205 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 ELF5Q9UKW6 265 aaPredicted RBP10.52□□□□□ -0.73
NFE4-201ENST00000420058 PKD1P98161 4303 aa10.52□□□□□ -0.73
NFE4-201ENST00000420058 IGLV11-55A0A075B6I3 123 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 J3QRK9 145 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 UBE2CO00762 179 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 S1PR2O95136 353 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 PSMB6P28072 239 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 RPS25P62851 125 aaKnown RBP10.51□□□□□ -0.73
NFE4-201ENST00000420058 ODF3L2Q3SX64 289 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 ZNF585BQ52M93 769 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 C8orf59Q8N0T1 100 aaPredicted RBP10.51□□□□□ -0.73
NFE4-201ENST00000420058 OR2C3Q8N628 320 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 PACRGLQ8N7B6 248 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 OR1L6Q8NGR2 347 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 TMEM167AQ8TBQ9 72 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 RAB22AQ9UL26 194 aa10.51□□□□□ -0.73
NFE4-201ENST00000420058 RBM7Q9Y580 266 aaKnown RBP10.51□□□□□ -0.73
NFE4-201ENST00000420058 CREBL2O60519 120 aaPredicted RBP10.5□□□□□ -0.73
NFE4-201ENST00000420058 KBTBD11O94819 623 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 HLA-DQB1P01920 261 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 RPL27AP46776 148 aaKnown RBP10.5□□□□□ -0.73
NFE4-201ENST00000420058 OR2B11Q5JQS5 317 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 OR4A47Q6IF82 309 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 ZNF645Q8N7E2 425 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 OR10R2Q8NGX6 335 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 GATAD1Q8WUU5 269 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 MARC2Q969Z3 335 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 EEF1AKMT3Q96AZ1 226 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 OR2A7Q96R45 310 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 GINS4Q9BRT9 223 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 DCUN1D5Q9BTE7 237 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 C5orf66Q9H5L9 145 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
NFE4-201ENST00000420058 UBQLN2Q9UHD9 624 aa10.5□□□□□ -0.73
NFE4-201ENST00000420058 RBMX2Q9Y388 322 aaKnown RBP10.5□□□□□ -0.73
NFE4-201ENST00000420058 IGKV1D-13A0A0B4J2D9 117 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 IGHV3-35A0A0C4DH35 117 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 PTGES3LE9PB15 166 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 IGKV1-13P0DP09 117 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 HIST1H1DP16402 221 aaKnown RBP10.49□□□□□ -0.73
NFE4-201ENST00000420058 GALP22466 123 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 APOC4P55056 127 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 ARFRP1Q13795 201 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 HES5Q5TA89 166 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
NFE4-201ENST00000420058 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 KIR2DL5BQ8NHK3 375 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 ZNF502Q8TBZ5 544 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 ZNF436Q9C0F3 470 aaPredicted RBP10.49□□□□□ -0.73
NFE4-201ENST00000420058 V9GY05 133 aa10.49□□□□□ -0.73
NFE4-201ENST00000420058 TRBV7-1A0A0A6YYK4 115 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 TSPAN4O14817 238 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 REG1AP05451 166 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 NFYAP23511 347 aaPredicted RBP10.48□□□□□ -0.73
NFE4-201ENST00000420058 MAS1LP35410 378 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 MAP2K4P45985 399 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 ELLP55199 621 aaPredicted RBP10.48□□□□□ -0.73
NFE4-201ENST00000420058 MRPS15P82914 257 aaKnown RBP10.48□□□□□ -0.73
NFE4-201ENST00000420058 FABP5Q01469 135 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 MED22Q15528 200 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 KCTD9Q7L273 389 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 UFD1Q92890 307 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
NFE4-201ENST00000420058 MAP6D1Q9H9H5 199 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 OR2W1Q9Y3N9 320 aa10.48□□□□□ -0.73
NFE4-201ENST00000420058 A0A075B6Q4 140 aa10.47□□□□□ -0.73
NFE4-201ENST00000420058 DPPA5A6NC42 116 aa10.47□□□□□ -0.73
NFE4-201ENST00000420058 HIST1H1BP16401 226 aaKnown RBP10.47□□□□□ -0.73
NFE4-201ENST00000420058 RPL35AP18077 110 aaKnown RBP10.47□□□□□ -0.73
NFE4-201ENST00000420058 CALRP27797 417 aaKnown RBP10.47□□□□□ -0.73
NFE4-201ENST00000420058 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
NFE4-201ENST00000420058 SLC38A6Q8IZM9 456 aa10.47□□□□□ -0.73
NFE4-201ENST00000420058 STPG3Q8N7X2 389 aa10.47□□□□□ -0.73
NFE4-201ENST00000420058 ZNF414Q96IQ9 312 aa10.47□□□□□ -0.73
NFE4-201ENST00000420058 GPHA2Q96T91 129 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms