RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KIFC1Q9BW19 673 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 TMEM222Q9H0R3 208 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 GABARAPL1Q9H0R8 117 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 BOLA2Q9H3K6 86 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 C16orf95Q9H693 158 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 NMNAT1Q9HAN9 279 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 KCNIP2Q9NS61 270 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 CISHQ9NSE2 258 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR5V1Q9UGF6 321 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 RPUSD1Q9UJJ7 312 aaKnown RBP1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 NDUFAF1Q9Y375 327 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 U3KQK5 164 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 ARAP1Q96P48 1450 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 PBRM1Q86U86 1689 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 THSD7AQ9UPZ6 1657 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 DCCP43146 1447 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 TOP2BQ02880 1626 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 ROCK1Q13464 1354 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 KDM5BQ9UGL1 1544 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 PRXQ9BXM0 1461 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 RAPGEF2Q9Y4G8 1499 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 KNCNA6PVL3 124 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 H3BMM0 161 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 MFSD11O43934 449 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 IFNA1P01562 189 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGLV7-43P04211 117 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 SERPINA7P05543 415 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 NBEAP1P0C6P0 100 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 CRYBB3P26998 211 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR8G1Q15617 311 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 PLPPR5Q32ZL2 321 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 LGALS9BQ3B8N2 356 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 LGALS9CQ6DKI2 356 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 SMIM15Q7Z3B0 74 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 C20orf196Q8IYI0 205 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 C12orf45Q8N5I9 185 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 RAB2BQ8WUD1 216 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 RASSF5Q8WWW0 418 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 UBE2WQ96B02 151 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 BORCS7Q96B45 105 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 BTF3L4Q96K17 158 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 CNBD2Q96M20 576 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 TRIB3Q96RU7 358 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 TBX5Q99593 518 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 CENPHQ9H3R5 247 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 TAAR3PQ9P1P4 343 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 TP73-AS1Q9UF72 201 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 SLC23A2Q9UGH3 650 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 ANGPT4Q9Y264 503 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 ICOSQ9Y6W8 199 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 SETD5Q9C0A6 1442 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 CCNB3Q8WWL7 1395 aa1.72□□□□□ -2.13
HMGB1P49-201ENST00000418882 PRDM2Q13029 1718 aa1.71□□□□□ -2.13
HMGB1P49-201ENST00000418882 CFAP43Q8NDM7 1665 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 NCOA2Q15596 1464 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 HECW1Q76N89 1606 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 IGKV1D-37A0A075B6S9 117 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 IGKV1D-43A0A0B4J1Z2 117 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 FUOMA2VDF0 154 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 LINC00862A6NCI5 91 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 K7ERS5 55 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 GSTZ1O43708 216 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 HLA-DRB1P01911 266 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 SULT1A3P0DMM9 295 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 SULT1A4P0DMN0 295 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 PTHLHP12272 177 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 ZNF140P52738 457 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 ARPC4P59998 168 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 HSPE1P61604 102 aaKnown RBP1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 C12orf74Q32Q52 190 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 ARHGAP11BQ3KRB8 267 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 C10orf91Q5T1B1 145 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 C3orf33Q6P1S2 294 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 SMARCD3Q6STE5 483 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 ANKRD29Q8N6D5 301 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR10K1Q8NGX5 313 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 GINS3Q9BRX5 216 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 C1orf50Q9BV19 199 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 TMEM147Q9BVK8 224 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 DDA1Q9BW61 102 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 C8orf4Q9NR00 106 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 MED29Q9NX70 200 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 SLC35A3Q9Y2D2 325 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 FIS1Q9Y3D6 152 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 ADAMTSL1Q8N6G6 1762 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 NCOA1Q15788 1441 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 TIAM1Q13009 1591 aa1.71□□□□□ -2.14
HMGB1P49-201ENST00000418882 A0A0B4J2C4 111 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 IGHV1-69-2A0A0G2JMI3 117 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 A0A0J9YY10 115 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 A0A1B0GX78 115 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 C19orf71A6NCJ1 209 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 FHAD1B1AJZ9 1412 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 PLA2G10O15496 165 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 PIAS1O75925 651 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 ZNF682O95780 498 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 GYPCP04921 128 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 CD7P09564 240 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 CCL3P10147 92 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 CPMP14384 443 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms