RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 VSIG10L2P0DP72 767 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 SPNP16150 400 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 VDAC2P45880 294 aaPredicted RBP6.75□□□□□ -1.33
TRIM48-201ENST00000417545 MECP2P51608 486 aaKnown RBP6.75□□□□□ -1.33
TRIM48-201ENST00000417545 RAG2P55895 527 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 TMEM187Q14656 261 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 LURAP1LQ8IV03 231 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 FAM219AQ8IW50 185 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 SLC35G3Q8N808 338 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 Q8N9W7 124 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 OR52B4Q8NGK2 314 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 GRPEL2Q8TAA5 225 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 ZNF431Q8TF32 576 aaPredicted RBP6.75□□□□□ -1.33
TRIM48-201ENST00000417545 GLYATL2Q8WU03 294 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 ZFAND2BQ8WV99 257 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 RITA1Q96K30 269 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 SPIN2AQ99865 258 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 SPIN2BQ9BPZ2 258 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 MARVELD1Q9BSK0 173 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 HINT2Q9BX68 163 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 COMMD5Q9GZQ3 224 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 ALX4Q9H161 411 aaPredicted RBP6.75□□□□□ -1.33
TRIM48-201ENST00000417545 ENY2Q9NPA8 101 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 FKBP11Q9NYL4 201 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 BET1LQ9NYM9 111 aa6.75□□□□□ -1.33
TRIM48-201ENST00000417545 MAST4O15021 2626 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 CDS2O95674 445 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 HLA-DRB1P01911 266 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 IL5P05113 134 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 MAS1LP35410 378 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 OR2B8PP59922 312 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 RPL8P62917 257 aaKnown RBP6.74□□□□□ -1.33
TRIM48-201ENST00000417545 SUPT4H1P63272 117 aaKnown RBP6.74□□□□□ -1.33
TRIM48-201ENST00000417545 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
TRIM48-201ENST00000417545 ZNF585BQ52M93 769 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 MRPL41Q8IXM3 137 aaKnown RBP6.74□□□□□ -1.33
TRIM48-201ENST00000417545 SELENOHQ8IZQ5 122 aaKnown RBP6.74□□□□□ -1.33
TRIM48-201ENST00000417545 C12orf45Q8N5I9 185 aaPredicted RBP6.74□□□□□ -1.33
TRIM48-201ENST00000417545 FAM71E2Q8N5Q1 922 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 OR4F5Q8NH21 305 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 OR1S1Q8NH92 325 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 TMEM167AQ8TBQ9 72 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 FYTTD1Q96QD9 318 aaKnown RBP6.74□□□□□ -1.33
TRIM48-201ENST00000417545 PRNDQ9UKY0 176 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 SIGLEC9Q9Y336 463 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 MMP24Q9Y5R2 645 aa6.74□□□□□ -1.33
TRIM48-201ENST00000417545 A0A0B4J2A0 478 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 C13orf42A0A1B0GVH6 325 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 C5orf51A6NDU8 294 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 SRRM4A7MD48 611 aaKnown RBP6.73□□□□□ -1.33
TRIM48-201ENST00000417545 UPK2O00526 184 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 IFNA17P01571 189 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 IGLV2-23P01705 113 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 SULT1A3P0DMM9 295 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 SULT1A4P0DMN0 295 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 HLA-GP17693 338 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 VDAC1P21796 283 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 RPL27AP46776 148 aaKnown RBP6.73□□□□□ -1.33
TRIM48-201ENST00000417545 BRWD1-AS2P59051 145 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 SLC35B1P78383 322 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 TMEM267Q0VDI3 215 aaPredicted RBP6.73□□□□□ -1.33
TRIM48-201ENST00000417545 FXYD3Q14802 87 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 POU2AF1Q16633 256 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 PRSS8Q16651 343 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 TATDN3Q17R31 274 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 ECSCRQ19T08 205 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 ANKRD55Q3KP44 614 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 FBLN7Q53RD9 439 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 LYZL2Q7Z4W2 148 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 PUSL1Q8N0Z8 303 aaKnown RBP6.73□□□□□ -1.33
TRIM48-201ENST00000417545 CHPT1Q8WUD6 406 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 MITD1Q8WV92 249 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 ARPC1AQ92747 370 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 LSM10Q969L4 123 aaKnown RBP6.73□□□□□ -1.33
TRIM48-201ENST00000417545 SEC22AQ96IW7 307 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 TMEM56Q96MV1 263 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 ZNF430Q9H8G1 570 aaPredicted RBP6.73□□□□□ -1.33
TRIM48-201ENST00000417545 TPSG1Q9NRR2 321 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 CACNG5Q9UF02 275 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 SHPKQ9UHJ6 478 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 NSG2Q9Y328 171 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 TMED3Q9Y3Q3 217 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 OR51B2Q9Y5P1 312 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 TMEM56-RWDD3S4R434 201 aa6.73□□□□□ -1.33
TRIM48-201ENST00000417545 C15orf61A6NNL5 157 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 SNRPGP15A8MWD9 76 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 AP4M1O00189 453 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 WRBO00258 174 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 GOSR2O14653 212 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 IGKV1-39P01597 117 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 IGKV1-5P01602 117 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 OPN1MWP04001 364 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 IGKV1D-39P04432 117 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 FGF2P09038 288 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 OR9G9P0C7N8 305 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 OPN1MW2P0DN77 364 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 OPN1MW3P0DN78 364 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 HOXA1P49639 335 aaPredicted RBP6.72□□□□□ -1.33
TRIM48-201ENST00000417545 BLCAPP62952 87 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms