RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 TBC1D24Q9ULP9 559 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 ATP6V0E1O15342 81 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 PROP1O75360 226 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 IGLV2-14P01704 120 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 LYL1P12980 280 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 PPIFP30405 207 aaKnown RBP9.97□□□□□ -0.81
LINC00339-202ENST00000416769 GNRHRP30968 328 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 DEFA1P59665 94 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 DEFA3P59666 94 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 NDPQ00604 133 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF833PQ6ZTB9 187 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 SLC38A6Q8IZM9 456 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF491Q8N8L2 437 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 ZFAND1Q8TCF1 268 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 DLX4Q92988 240 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-202ENST00000416769 SLC25A21Q9BQT8 299 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF251Q9BRH9 671 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 RSRP1Q9BUV0 290 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 FXYD6Q9H0Q3 95 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 OR2D2Q9H210 308 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 SDHAF2Q9NX18 166 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 GPR132Q9UNW8 380 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 FBXO7Q9Y3I1 522 aa9.97□□□□□ -0.81
LINC00339-202ENST00000416769 SAA2-SAA4A0A096LPE2 208 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 GPR31O00270 319 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 TXNL1O43396 289 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 SOX15O60248 233 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 IGF1P05019 195 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 SAA2P0DJI9 122 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-202ENST00000416769 CD1BP29016 333 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 BTCP35070 178 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 ZNF818PQ6ZRF7 136 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 BVESQ8NE79 360 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 MARCH1Q8TCQ1 289 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 MRGPRFQ96AM1 343 aa9.96□□□□□ -0.82
LINC00339-202ENST00000416769 ZNF486Q96H40 463 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-202ENST00000416769 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 A0A087WW49 117 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 SAP30O75446 220 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 CTSDP07339 412 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-202ENST00000416769 GP9P14770 177 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 PGAM2P15259 253 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 CCR6P51684 374 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 ZNF616Q08AN1 781 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-202ENST00000416769 RBMS2Q15434 407 aaKnown RBP9.95□□□□□ -0.82
LINC00339-202ENST00000416769 MMDQ15546 238 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 RPL39P5Q59GN2 51 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 CMTM1Q8IZ96 169 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 POC5Q8NA72 575 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 ARPC1AQ92747 370 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 ADTRPQ96IZ2 230 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 COPZ2Q9P299 210 aa9.95□□□□□ -0.82
LINC00339-202ENST00000416769 IGHV7-81A0A0B4J1V7 117 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 FAM240BA0A1B0GVZ2 78 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 OVOL1O14753 267 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 NDUFB6O95139 128 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 OR8U8P0C7N1 319 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 S100GP29377 79 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 DUTP33316 252 aaKnown RBP9.94□□□□□ -0.82
LINC00339-202ENST00000416769 RND3P61587 244 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 TAGLNQ01995 201 aaKnown RBP9.94□□□□□ -0.82
LINC00339-202ENST00000416769 DUSP18Q8NEJ0 188 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 UBE2E2Q96LR5 201 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 HSD17B10Q99714 261 aaKnown RBP9.94□□□□□ -0.82
LINC00339-202ENST00000416769 NABP2Q9BQ15 211 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-202ENST00000416769 GON7Q9BXV9 100 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 MRPL20Q9BYC9 149 aaKnown RBP9.94□□□□□ -0.82
LINC00339-202ENST00000416769 C14orf166Q9Y224 244 aaKnown RBP9.94□□□□□ -0.82
LINC00339-202ENST00000416769 VSIG4Q9Y279 399 aa9.94□□□□□ -0.82
LINC00339-202ENST00000416769 M0R1X1 148 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-202ENST00000416769 TCRBP04435 133 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 MC5RP33032 325 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 RAB9AP51151 201 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 ECSCRQ19T08 205 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 OR5AN1Q8NGI8 311 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 CITED4Q96RK1 184 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 OR51J1Q9H342 316 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 C5orf66Q9H5L9 145 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 EDA2RQ9HAV5 297 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
LINC00339-202ENST00000416769 TRAV41A0A0B4J266 112 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 MPPED1O15442 326 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 IGHV3-11P01762 117 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 RRASP10301 218 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 PIGPP57054 158 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 RUNX1Q01196 453 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 CATR1Q13166 79 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 PHLDA2Q53GA4 152 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms