RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 TOX4O94842 621 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 AVPP01185 164 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 HLA-GP17693 338 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 DLX1P56177 255 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 LINC00205P59089 165 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 PRB3Q04118 309 aaPredicted RBP7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 EIF4EBP1Q13541 118 aaPredicted RBP7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 CT45A1Q5HYN5 189 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 C9orf152Q5JTZ5 239 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 CCDC71LQ8N9Z2 235 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 ZNF439Q8NDP4 499 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 CT45A3Q8NHU0 189 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 ZDHHC16Q969W1 377 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 PCGF1Q9BSM1 259 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 IFI27L2Q9H2X8 130 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 GAL3ST2Q9H3Q3 398 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 KPTNQ9Y664 436 aa7.51□□□□□ -1.21
CHRNA1-206ENST00000416004 TRAV40A0A0B4J280 105 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 A0A0B4J2A0 478 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 C3orf85A0A1B0GTC6 90 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 A0A1W2PPH5 198 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 MAS1LP35410 378 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 GNG10P50151 68 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 CAV2P51636 162 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 PKIAP61925 76 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 RPL30P62888 115 aaKnown RBP7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 HEPN1Q6WQI6 88 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 C1orf229Q6ZS94 237 aaPredicted RBP7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 CMTM1Q8IZ96 169 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 ZNF645Q8N7E2 425 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 LY6G5BQ8NDX9 201 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 OR5M8Q8NGP6 311 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 OR51H1Q8NH63 302 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 C8orf46Q8TAG6 207 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 FAM216AQ8WUB2 273 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 C22orf15Q8WYQ4 148 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 SHPKQ9UHJ6 478 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
CHRNA1-206ENST00000416004 ATRQ13535 2644 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 VENTXO95231 258 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 IFNA17P01571 189 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 HOXB5P09067 269 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 HKR1P10072 659 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 HIST1H1BP16401 226 aaKnown RBP7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 RAB5AP20339 215 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 HOXA5P20719 270 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 F2RP25116 425 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 S100A2P29034 98 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 EIF5AP63241 154 aaKnown RBP7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 RPL39P5Q59GN2 51 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 LIAT1Q6ZQX7 453 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 ODF3L1Q8IXM7 274 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 OR52M1Q8NGK5 317 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 AKR1E2Q96JD6 320 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 ABHD14AQ9BUJ0 271 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 RAB9BQ9NP90 201 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 KCNIP3Q9Y2W7 256 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 C17orf98A8MV24 154 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 TSTD3H0UI37 97 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 H0Y980 276 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 FSHBP01225 129 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 CDX1P47902 265 aaPredicted RBP7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 BRWD1-AS2P59051 145 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 SRSF2Q01130 221 aaKnown RBP7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 LYZL2Q7Z4W2 148 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 FAM219AQ8IW50 185 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 SIGLECL1Q8N7X8 197 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 INO80EQ8NBZ0 244 aaPredicted RBP7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 OR10A7Q8NGE5 316 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 SEC22AQ96IW7 307 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 ONECUT1Q9UBC0 465 aa7.49□□□□□ -1.21
CHRNA1-206ENST00000416004 ANK3Q12955 4377 aaKnown RBP7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 hCG_1809904A0A1W2PP81 198 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 A0A1W2PPE2 198 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 A0A1W2PR64 198 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 A0A1W2PRV1 198 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 LINC00473A8K010 186 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 ITGB1BP1O14713 200 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 CD5P06127 495 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 IGHV1-8P0DP01 117 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 UCP1P25874 307 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 DDTP30046 118 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 GPR12P47775 334 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 HNF4GQ14541 408 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 TMEM30BQ3MIR4 351 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 ZNF585BQ52M93 769 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 SLC25A48Q6ZT89 311 aaKnown RBP7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 BAP18Q8IXM2 172 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 Q8N7P7 452 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 C3orf56Q8N813 242 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 LRTM2Q8N967 370 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 RBMXL1Q96E39 390 aaKnown RBP7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 OR10C1Q96KK4 312 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 RAB18Q9NP72 206 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 FAM96BQ9Y3D0 163 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 COL6A5A8TX70 2615 aa7.48□□□□□ -1.21
CHRNA1-206ENST00000416004 IGHV3OR16-10A0A075B7F0 116 aa7.47□□□□□ -1.21
CHRNA1-206ENST00000416004 SAA2-SAA4A0A096LPE2 208 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms