RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 IGKV1-39P01597 117 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 IGKV1D-39P04432 117 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 SERPINE2P07093 398 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 P0C879 139 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 PPIFP30405 207 aaKnown RBP9.38□□□□□ -0.91
ATG4B-207ENST00000415107 LPAR6P43657 344 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 ERVK-16P61578 105 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 SUPT4H1P63272 117 aaKnown RBP9.38□□□□□ -0.91
ATG4B-207ENST00000415107 SRPXP78539 464 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TMEM95Q3KNT9 176 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 AKIRIN2Q53H80 203 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 C9orf152Q5JTZ5 239 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 SHISA2Q6UWI4 295 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 SGPP2Q8IWX5 399 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 GLYATL2Q8WU03 294 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 ARPC1AQ92747 370 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TMEM56Q96MV1 263 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TP53RKQ96S44 253 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TSC22D3Q99576 134 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
ATG4B-207ENST00000415107 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TMEM140Q9NV12 185 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TBC1D24Q9ULP9 559 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 KCNIP3Q9Y2W7 256 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TMEM56-RWDD3S4R434 201 aa9.38□□□□□ -0.91
ATG4B-207ENST00000415107 TEX13DA0A0J9YY54 714 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 UPK2O00526 184 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 ARPC1BO15143 372 aaKnown RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 IGHG4P01861 327 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 OR5AC1P0C628 307 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 MECP2P51608 486 aaKnown RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 CCR6P51684 374 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 RPL8P62917 257 aaKnown RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 SLC35B1P78383 322 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 IFITM3Q01628 133 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 TMEM267Q0VDI3 215 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 ARSJQ5FYB0 599 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 THOC7Q6I9Y2 204 aaKnown RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 SLC25A42Q86VD7 318 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 CENPSQ8N2Z9 138 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 LRTM2Q8N967 370 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
ATG4B-207ENST00000415107 PALMDQ9NP74 551 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 NUBP2Q9Y5Y2 271 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 TNCP24821 2201 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 DNHD1Q96M86 4753 aa9.37□□□□□ -0.91
ATG4B-207ENST00000415107 DUXBA0A1W2PPF3 345 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 PSMB11A5LHX3 300 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 LINC01548A6NM66 108 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 H3BUA1 57 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 ELANEP08246 267 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 ANXA3P12429 323 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 VDAC1P21796 283 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 CD83Q01151 205 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 PJVKQ0ZLH3 352 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 TMEM187Q14656 261 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 FXYD3Q14802 87 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 KLK9Q2XQG4 91 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 MZT2BQ6NZ67 158 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 VKORC1L1Q8N0U8 176 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 C3orf56Q8N813 242 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 ADAD2Q8NCV1 583 aaKnown RBP9.36□□□□□ -0.91
ATG4B-207ENST00000415107 DMBX1Q8NFW5 382 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 OR4X2Q8NGF9 303 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 MYOZ3Q8TDC0 251 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 SRSF12Q8WXF0 261 aaKnown RBP9.36□□□□□ -0.91
ATG4B-207ENST00000415107 RBPMSQ93062 196 aaKnown RBP9.36□□□□□ -0.91
ATG4B-207ENST00000415107 LSM10Q969L4 123 aaKnown RBP9.36□□□□□ -0.91
ATG4B-207ENST00000415107 SPIN2AQ99865 258 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 SPIN2BQ9BPZ2 258 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 KLK9Q9UKQ9 250 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 FBXO7Q9Y3I1 522 aa9.36□□□□□ -0.91
ATG4B-207ENST00000415107 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 A0A0B4J2A0 478 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 C15orf61A6NNL5 157 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 KRASP01116 189 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 HLA-GP17693 338 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 PSMB8P28062 276 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 KRTAP10-3P60369 221 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 FOXE3Q13461 319 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 TEX38Q6PEX7 206 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 HSD17B13Q7Z5P4 300 aaPredicted RBP9.35□□□□□ -0.91
ATG4B-207ENST00000415107 ZNF429Q86V71 674 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 DUSP18Q8NEJ0 188 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 OR5M8Q8NGP6 311 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 OR5B3Q8NH48 314 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 NOL4LQ96MY1 436 aaPredicted RBP9.35□□□□□ -0.91
ATG4B-207ENST00000415107 C20orf85Q9H1P6 137 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 PARP11Q9NR21 331 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 TMEM14BQ9NUH8 114 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 FKBP11Q9NYL4 201 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 SHPKQ9UHJ6 478 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 PRNDQ9UKY0 176 aa9.35□□□□□ -0.91
ATG4B-207ENST00000415107 ZNF257Q9Y2Q1 563 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms