RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 VKORC1L1Q8N0U8 176 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 C5orf56Q8N8D9 126 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 VSTM2AQ8TAG5 236 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 CHAC2Q8WUX2 184 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 GPR146Q96CH1 333 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 SLC25A33Q9BSK2 321 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 TMEM140Q9NV12 185 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 C1RLQ9NZP8 487 aa10.56□□□□□ -0.72
CNN3-203ENST00000415017 DNAJC9-AS1A6NH13 148 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 UPK2O00526 184 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 SLC25A17O43808 307 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 ADAP1O75689 374 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 KBTBD11O94819 623 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 OR2A4O95047 310 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 HLA-DRB1P01911 266 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 OR9G9P0C7N8 305 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 SULT1A3P0DMM9 295 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 SULT1A4P0DMN0 295 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 HES1Q14469 280 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 HNF4GQ14541 408 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 MMDQ15546 238 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 VMA21Q3ZAQ7 101 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 PDLIM3Q53GG5 364 aaPredicted RBP10.55□□□□□ -0.72
CNN3-203ENST00000415017 GGNBP1Q5YKI7 109 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 LIN54Q6MZP7 749 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 ZNF429Q86V71 674 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 PPP1R27Q86WC6 154 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 FOXRED2Q8IWF2 684 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 OR2A7Q96R45 310 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 CHIAQ9BZP6 476 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 TPSG1Q9NRR2 321 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 TMEM14BQ9NUH8 114 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
CNN3-203ENST00000415017 SETD2Q9BYW2 2564 aaPredicted RBP10.55□□□□□ -0.72
CNN3-203ENST00000415017 TRAV3A0A0B4J244 114 aa10.54□□□□□ -0.72
CNN3-203ENST00000415017 A0A1B0GU03 582 aa10.54□□□□□ -0.72
CNN3-203ENST00000415017 M0QZK8 103 aa10.54□□□□□ -0.72
CNN3-203ENST00000415017 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
CNN3-203ENST00000415017 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
CNN3-203ENST00000415017 LY6EQ16553 131 aa10.54□□□□□ -0.72
CNN3-203ENST00000415017 PRSS8Q16651 343 aa10.54□□□□□ -0.72
CNN3-203ENST00000415017 TMEM219Q86XT9 240 aa10.54□□□□□ -0.72
CNN3-203ENST00000415017 ZNF418Q8TF45 676 aaPredicted RBP10.54□□□□□ -0.72
CNN3-203ENST00000415017 FBXL15Q9H469 300 aa10.54□□□□□ -0.72
CNN3-203ENST00000415017 ZNF430Q9H8G1 570 aaPredicted RBP10.54□□□□□ -0.72
CNN3-203ENST00000415017 METTL1Q9UBP6 276 aaKnown RBP10.54□□□□□ -0.72
CNN3-203ENST00000415017 C15orf61A6NNL5 157 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 MPTX1A8MV57 137 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 FCN1O00602 326 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 HOXB5P09067 269 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 MAS1LP35410 378 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 ERVK-16P61578 105 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
CNN3-203ENST00000415017 PJVKQ0ZLH3 352 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 IZUMO4Q1ZYL8 232 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 RBMS3Q6XE24 437 aaKnown RBP10.53□□□□□ -0.72
CNN3-203ENST00000415017 SSX9Q7RTT3 188 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 H2BFWTQ7Z2G1 175 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 DMBX1Q8NFW5 382 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 OR5M8Q8NGP6 311 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 RRNAD1Q96FB5 475 aaKnown RBP10.53□□□□□ -0.72
CNN3-203ENST00000415017 OR10C1Q96KK4 312 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 ZNF580Q9UK33 172 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 FOXA2Q9Y261 457 aaPredicted RBP10.53□□□□□ -0.72
CNN3-203ENST00000415017 ZNF257Q9Y2Q1 563 aa10.53□□□□□ -0.72
CNN3-203ENST00000415017 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 BTBD17A6NE02 478 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 CGB1A6NKQ9 187 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 GPR137BO60478 399 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 TRAPPC2P0DI81 140 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 TRAPPC2BP0DI82 140 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 CXCL3P19876 107 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 AKR1C2P52895 323 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 CRIP2P52943 208 aaPredicted RBP10.52□□□□□ -0.73
CNN3-203ENST00000415017 H2BFSP57053 126 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 RPL8P62917 257 aaKnown RBP10.52□□□□□ -0.73
CNN3-203ENST00000415017 UBA52P62987 128 aaKnown RBP10.52□□□□□ -0.73
CNN3-203ENST00000415017 SMCO1Q147U7 214 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 FCN2Q15485 313 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 ZNF562Q6V9R5 426 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 MMD2Q8IY49 270 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 Q8N2B8 174 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 OR11H7Q8NGC8 314 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 OR4D5Q8NGN0 318 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 OR52E5Q8NH55 327 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 JMJD8Q96S16 334 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.52□□□□□ -0.73
CNN3-203ENST00000415017 KIAA1456Q9P272 454 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 C2CD3Q4AC94 2353 aa10.52□□□□□ -0.73
CNN3-203ENST00000415017 IGHV7-81A0A0B4J1V7 117 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 A0A1B0GW64 132 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 HMX3A6NHT5 357 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 NCBP2LA6PVI3 153 aaKnown RBP10.51□□□□□ -0.73
CNN3-203ENST00000415017 INS-IGF2F8WCM5 200 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 IFNA21P01568 189 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 IGHG2P01859 326 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 COMPP49747 757 aaPredicted RBP10.51□□□□□ -0.73
CNN3-203ENST00000415017 ID3Q02535 119 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 OR5B3Q8NH48 314 aa10.51□□□□□ -0.73
CNN3-203ENST00000415017 MED28Q9H204 178 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms