RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FCGR3BO75015 233 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 SP1P08047 785 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 IGHV3-43DP0DP04 118 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 AREGP15514 252 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 ERVK-16P61578 105 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 RHOBP62745 196 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 RPL31P62899 125 aaKnown RBP14.62□□□□□ -0.07
SDCBP-202ENST00000413219 OR1L6Q8NGR2 347 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 HSPB9Q9BQS6 159 aa14.62□□□□□ -0.07
SDCBP-202ENST00000413219 COL27A1Q8IZC6 1860 aaPredicted RBP14.62□□□□□ -0.07
SDCBP-202ENST00000413219 USF3Q68DE3 2245 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 TRGV8A0A0C4DH27 118 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 K7EN84 100 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 DLEU1O43261 78 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 TDGF1P13385 188 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 MPV17P39210 176 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 TNFSF10P50591 281 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 SMIM21Q3B7S5 101 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 WDR82Q6UXN9 313 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 GTF3C1Q12789 2109 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 KLRC4-KLRK1H3BQV0 150 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 AQP7O14520 342 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 IL6RP08887 468 aaPredicted RBP14.61□□□□□ -0.07
SDCBP-202ENST00000413219 THBS3P49746 956 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 RPL19P84098 196 aaKnown RBP14.61□□□□□ -0.07
SDCBP-202ENST00000413219 RPEL1Q2QD12 228 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 HLA-DRB5Q30154 266 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 INO80CQ6PI98 192 aaPredicted RBP14.61□□□□□ -0.07
SDCBP-202ENST00000413219 LINC00696Q6ZRV3 163 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 VAMP8Q9BV40 100 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 GNB1LQ9BYB4 327 aa14.61□□□□□ -0.07
SDCBP-202ENST00000413219 DEFB108AA8MXU0 73 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 PROP1O75360 226 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 KIR2DS2P43631 304 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 RELBQ01201 579 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 CXorf67Q86X51 503 aaPredicted RBP14.6□□□□□ -0.07
SDCBP-202ENST00000413219 BAGE3Q86Y29 109 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 BAGE2Q86Y30 109 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 RFESDQ8TAC1 157 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 EAF1Q96JC9 268 aaPredicted RBP14.6□□□□□ -0.07
SDCBP-202ENST00000413219 TMEM208Q9BTX3 173 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 JPT1Q9UK76 154 aa14.6□□□□□ -0.07
SDCBP-202ENST00000413219 CFAP54Q96N23 3096 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 FCN1O00602 326 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 MT-ND6P03923 174 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 OR10J4P0C629 311 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 HNF1AP20823 631 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 EFNB3Q15768 340 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 COX19Q49B96 90 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 MDS2Q8NDY4 140 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 Q8TCH9 128 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 C1orf159Q96HA4 380 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 OPN3Q9H1Y3 402 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-202ENST00000413219 DOCK11Q5JSL3 2073 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 C21orf140B9A014 251 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 SLC17A3O00476 420 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 RAB31Q13636 194 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 KRTCAP3Q53RY4 240 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 TEPPQ6URK8 271 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 MMD2Q8IY49 270 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 TUBG2Q9NRH3 451 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 METRNQ9UJH8 293 aa14.59□□□□□ -0.07
SDCBP-202ENST00000413219 IRF2P14316 349 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 IGHV1-2P23083 117 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 WDR73Q6P4I2 378 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 TPRX1Q8N7U7 411 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 SAMD10Q9BYL1 202 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 SLC25A10Q9UBX3 287 aaPredicted RBP14.58□□□□□ -0.08
SDCBP-202ENST00000413219 TCF19Q9Y242 345 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 GOLT1BQ9Y3E0 138 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 V9GYV3 84 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 PTPRBP23467 1997 aa14.58□□□□□ -0.08
SDCBP-202ENST00000413219 SAA2-SAA4A0A096LPE2 208 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 C9orf172C9J069 976 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 M0R1X1 148 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 CD33P20138 364 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 CDKN1AP38936 164 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 MORN2Q502X0 79 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 FAM90A1Q86YD7 464 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 ABHD12Q8N2K0 398 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 STPG3Q8N7X2 389 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 OR4B1Q8NGF8 309 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 CDX2Q99626 313 aaPredicted RBP14.57□□□□□ -0.08
SDCBP-202ENST00000413219 SFXN3Q9BWM7 321 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 PRUNE2Q8WUY3 3088 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 DIDO1Q9BTC0 2240 aaKnown RBP14.57□□□□□ -0.08
SDCBP-202ENST00000413219 SNURFLB1AK76 121 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 FNDC10F2Z333 226 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 BRS3P32247 399 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 IER3P46695 156 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 COMPP49747 757 aaPredicted RBP14.57□□□□□ -0.08
SDCBP-202ENST00000413219 TDRG1Q3Y452 100 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 SSMEM1Q8WWF3 244 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 LRFN3Q9BTN0 628 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 SEPSECSQ9HD40 501 aaKnown RBP14.57□□□□□ -0.08
SDCBP-202ENST00000413219 IL17BQ9UHF5 180 aa14.57□□□□□ -0.08
SDCBP-202ENST00000413219 TRGV5A0A0B4J1U4 118 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 TFF1P04155 84 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 LINC00614P0C842 121 aa14.56□□□□□ -0.08
SDCBP-202ENST00000413219 CR1LQ2VPA4 569 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms