RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ABHD14BQ96IU4 210 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.21□□□□□ -1.26
SYNE1-211ENST00000413186 TRAV21A0A0B4J279 112 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 IGKV1-9A0A0C4DH69 117 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 H0YL77 283 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 MFNGO00587 321 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 KRASP01116 189 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 IGHV1-46P01743 117 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 LGALSLQ3ZCW2 172 aaPredicted RBP7.2□□□□□ -1.26
SYNE1-211ENST00000413186 FAM74A1Q5RGS3 127 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 HDHD3Q9BSH5 251 aaPredicted RBP7.2□□□□□ -1.26
SYNE1-211ENST00000413186 LPAR2Q9HBW0 351 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 MMP26Q9NRE1 261 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 IDI2-AS1Q9NZ38 188 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 JPT1Q9UK76 154 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 GPR132Q9UNW8 380 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 F2RL2O00254 374 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 TYMSP04818 313 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 CRYBA1P05813 215 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 CD37P11049 281 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 MC5RP33032 325 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 TIGITQ495A1 244 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 STUMQ69YW2 141 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 BPIFA4PQ86YQ2 179 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM37Q8WXS4 190 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 RNF2Q99496 336 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 PCGF1Q9BSM1 259 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 AP4M1O00189 453 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 OR2A4O95047 310 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 CSN1S1P47710 185 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 GNB1P62873 340 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 TOR2AQ5JU69 321 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 Q6ZRG5 221 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 TPRX1Q8N7U7 411 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 SLC35E1Q96K37 410 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 OR2A7Q96R45 310 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 ABHD14AQ9BUJ0 271 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 Q9N2K0 584 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 CELSR3Q9NYQ7 3312 aa7.2□□□□□ -1.26
SYNE1-211ENST00000413186 UBE2L6O14933 153 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 EFNA4P52798 201 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM42Q69YG0 159 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 WDR82Q6UXN9 313 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 C1QL2Q7Z5L3 287 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM116Q8NCL8 245 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 GTF3AQ92664 365 aaKnown RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 CHODLQ9H9P2 273 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 RCL1Q9Y2P8 373 aaKnown RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 LOC400499M0QZD8 3231 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 WNT9BO14905 357 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 SSSCA1O60232 199 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 SRSF4Q08170 494 aaKnown RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM267Q0VDI3 215 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 UNC119Q13432 240 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM140Q9NV12 185 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 PSENENQ9NZ42 101 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 CRIM1Q9NZV1 1036 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 GAPDHP04406 335 aaKnown RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 PRSS2P07478 247 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 PSG2P11465 335 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 MMP9P14780 707 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 CDKN1AP38936 164 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TDGF1P3P51864 188 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF672Q499Z4 452 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 GAPTQ8N292 157 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM217Q8N7C4 229 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 VCX2Q9H322 139 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF430Q9H8G1 570 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 CCL28Q9NRJ3 127 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TNFSF18Q9UNG2 199 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 VSIG4Q9Y279 399 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 CACNA1DQ01668 2161 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 XKRY2A2RUG3 117 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 IGLV1-44P01699 117 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 MBPP02686 304 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 OR5AC1P0C628 307 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 PJVKQ0ZLH3 352 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 SP6Q3SY56 376 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 OR9G1Q8NH87 305 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 PERPQ96FX8 193 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 CYSLTR1Q9Y271 337 aa7.19□□□□□ -1.26
SYNE1-211ENST00000413186 TBL2Q9Y4P3 447 aaKnown RBP7.19□□□□□ -1.26
SYNE1-211ENST00000413186 FREM2Q5SZK8 3169 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 SRRM5B3KS81 715 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 SYNGR2O43760 224 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 FGF2P09038 288 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 VSIG10L2P0DP72 767 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 UCP3P55916 312 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF66Q6ZN08 573 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 TBC1D26Q86UD7 250 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 OR2C3Q8N628 320 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 Q8NA96 180 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 SFT2D1Q8WV19 159 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 CADP27708 2225 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 GNG7O60262 68 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 GLIPR1P48060 266 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 HGFACQ04756 655 aa7.18□□□□□ -1.26
SYNE1-211ENST00000413186 ASPHD2Q6ICH7 369 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms