RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TMEM106BQ9NUM4 274 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 FGF5P12034 268 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
SCN9A-203ENST00000409672 SBF1O95248 1867 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 ABCA1O95477 2261 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 COX6CP09669 75 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 PRSS54Q6PEW0 395 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 OR51G1Q8NGK1 321 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 OR4D5Q8NGN0 318 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 NPIPB3Q92617 1050 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 KIAA1551Q9HCM1 1747 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 SSC4DQ8WTU2 575 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 ZFP30Q9Y2G7 519 aa7.19□□□□□ -1.26
SCN9A-203ENST00000409672 IGLV3-16A0A075B6K0 115 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 GGCTO75223 188 aaKnown RBP7.18□□□□□ -1.26
SCN9A-203ENST00000409672 UBR3Q6ZT12 1888 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 GATA4P43694 442 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 JKAMPQ9P055 326 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 MYLKQ15746 1914 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 TMEM238LA0A1B0GVL6 79 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 A6NJY4 79 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 RAB9AP51151 201 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 IL19Q9UHD0 177 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 A0A1W2PQD3 144 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 SNAI2O43623 268 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF688P0C7X2 276 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 C10orf128Q5T292 105 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 ANAPC16Q96DE5 110 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 PITX3O75364 302 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 ACAA1P09110 424 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-203ENST00000409672 PEMTQ9UBM1 199 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 FAM186AA6NE01 2351 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.18□□□□□ -1.26
SCN9A-203ENST00000409672 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 KIR2DL4Q99706 377 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 SEMA5BQ9P283 1151 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 MOSPD3O75425 235 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 VENTXO95231 258 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 PGA4P0DJD7 388 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 TMEM42Q69YG0 159 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 BIVMQ86UB2 503 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 UBE2E2Q96LR5 201 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 TDGF1P3P51864 188 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 PSG9Q00887 426 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 DEGS2Q6QHC5 323 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 BRD3OSQ6XYD6 125 aa7.18□□□□□ -1.26
SCN9A-203ENST00000409672 TRPM3Q9HCF6 1732 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 GAGE10A6NGK3 116 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 CLPSP04118 112 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 P2RY1P47900 373 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 FGF12P61328 243 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 IL17RELQ6ZVW7 336 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 MMD2Q8IY49 270 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 CHST5Q9GZS9 411 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 RREB1Q92766 1687 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 MED12Q93074 2177 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 SSBP1Q04837 148 aaKnown RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 AWAT1Q58HT5 328 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 Q6ZNX1 250 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 ELF5Q9UKW6 265 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 GRIFINA4D1Z8 144 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 DRAM1Q8N682 238 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 CITED2Q99967 270 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 GREB1LQ9C091 1923 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 NHSL1Q5SYE7 1610 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 PGA5P0DJD9 388 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 CRYBB3P26998 211 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 MRPL30Q8TCC3 161 aaKnown RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 JMJD8Q96S16 334 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 RAB33BQ9H082 229 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 TRPM7Q96QT4 1865 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 RAMP1O60894 148 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 EGR1P18146 543 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 TRAV21A0A0B4J279 112 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 DMRTA1Q5VZB9 504 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF703Q9H7S9 590 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-203ENST00000409672 KLRD1Q13241 179 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 FAM216BQ8N7L0 139 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 RHOVQ96L33 236 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 DLL3Q9NYJ7 618 aa7.17□□□□□ -1.26
SCN9A-203ENST00000409672 TRAV8-6A0A0B4J262 113 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 LEMD1Q68G75 181 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 ZBTB34Q8NCN2 500 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 OR51M1Q9H341 326 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 DSPPQ9NZW4 1301 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 CFHR3Q02985 330 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 SRSF6Q13247 344 aaKnown RBP7.16□□□□□ -1.26
SCN9A-203ENST00000409672 KIAA0040Q15053 153 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 ANKRD20A5PA0PJZ0 165 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 MMP16P51512 607 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 LINC00596Q86U02 117 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 FGFRL1Q8N441 504 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 ST6GALNAC3Q8NDV1 305 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 DNAJC4Q9NNZ3 241 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 NEU3Q9UQ49 428 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 RPL34P49207 117 aaKnown RBP7.16□□□□□ -1.26
SCN9A-203ENST00000409672 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 TRAV24A0A0B4J272 114 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms