RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 NAT1P18440 290 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 PRSS3P35030 304 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 RPL27AP46776 148 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 ZNF45Q02386 682 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 CATR1Q13166 79 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 OR4A5Q8NH83 315 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 BORCS5Q969J3 196 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 CMTM3Q96MX0 182 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 EHFQ9NZC4 300 aa15.01□□□□□ -0.01
TSPAN4-209ENST00000409543 HMX3A6NHT5 357 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 SULT1C2O00338 296 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 IGLV1-51P01701 117 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 IL6RP08887 468 aaPredicted RBP15□□□□□ -0.01
TSPAN4-209ENST00000409543 ZNF735P0CB33 412 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 RFX2P48378 723 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 HERV-K104P61576 105 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 VBP1P61758 197 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 ATP5G2Q06055 141 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 TATDN3Q17R31 274 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 ZNF818PQ6ZRF7 136 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 SSX9Q7RTT3 188 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 TMEM17Q86X19 198 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 NECAP1Q8NC96 275 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 OR9G4Q8NGQ1 327 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 SLC2A9Q9NRM0 540 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 BET1LQ9NYM9 111 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 COMMD3Q9UBI1 195 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 ZNF257Q9Y2Q1 563 aa15□□□□□ -0.01
TSPAN4-209ENST00000409543 NPIPB5A8MRT5 1133 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 HPRT1P00492 218 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 APOA1P02647 267 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 EIF4EP06730 217 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 GNRHRP30968 328 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 SYNJ2BPP57105 145 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 TAS2R31P59538 309 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 TAS2R46P59540 309 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 RPL8P62917 257 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 OR4A47Q6IF82 309 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 IL34Q6ZMJ4 242 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 ANKRD13BQ86YJ7 626 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 CD300LFQ8TDQ1 290 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 FYTTD1Q96QD9 318 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 RSRP1Q9BUV0 290 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 ADAM30Q9UKF2 790 aa14.99□□□□□ -0.01
TSPAN4-209ENST00000409543 SMIM31A0A1B0GVY4 71 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 A0A1B0GW64 132 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 DPPA5A6NC42 116 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 E7EUB6 86 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 PMP2P02689 132 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 HLA-GP17693 338 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 EXOSC2Q13868 293 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 POU2AF1Q16633 256 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 RPEL1Q2QD12 228 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 FAM209BQ5JX69 171 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 HAPLN4Q86UW8 402 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 LYSMD2Q8IV50 215 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 OR5H2Q8NGV7 314 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 MOB3AQ96BX8 217 aa14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 ZNF2Q9BSG1 426 aaPredicted RBP14.98□□□□□ -0.01
TSPAN4-209ENST00000409543 TENM3Q9P273 2699 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 OR2J3O76001 311 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 CRYGCP07315 174 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 NQO2P16083 231 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 AADACL3Q5VUY0 350 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 OR51H1Q8NH63 302 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 GPX8Q8TED1 209 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 WWC2-AS2Q96NR7 200 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 ASCL2Q99929 193 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 PLEKHA2Q9HB19 425 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 HRASLSQ9HDD0 168 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 SIGLEC8Q9NYZ4 499 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 U3KQK5 164 aa14.97□□□□□ -0.01
TSPAN4-209ENST00000409543 BMPR1BO00238 502 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 AREGP15514 252 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 PSMB6P28072 239 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 RORCP51449 518 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 C15orf32Q32M92 178 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 OR6F1Q8NGZ6 308 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 SCPEP1Q9HB40 452 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 FBXL7Q9UJT9 491 aa14.96□□□□□ -0.01
TSPAN4-209ENST00000409543 UPK2O00526 184 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 PGLYRP1O75594 196 aaPredicted RBP14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 DHFRP00374 187 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 CSN3P07498 182 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 FGF2P09038 288 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 SMIM18P0DKX4 95 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 CTRB1P17538 263 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 ELK1P19419 428 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 KLK9Q2XQG4 91 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 CTRB2Q6GPI1 263 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 COMMD9Q9P000 198 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 KLK9Q9UKQ9 250 aa14.95□□□□□ -0.02
TSPAN4-209ENST00000409543 CGB1A6NKQ9 187 aa14.94□□□□□ -0.02
TSPAN4-209ENST00000409543 H0Y980 276 aa14.94□□□□□ -0.02
TSPAN4-209ENST00000409543 HPGDSO60760 199 aa14.94□□□□□ -0.02
TSPAN4-209ENST00000409543 S1PR2O95136 353 aa14.94□□□□□ -0.02
TSPAN4-209ENST00000409543 GABARAPO95166 117 aa14.94□□□□□ -0.02
TSPAN4-209ENST00000409543 MYOD1P15172 320 aa14.94□□□□□ -0.02
TSPAN4-209ENST00000409543 HLA-DMAP28067 261 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms