RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SERTAD4Q9NUC0 356 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 OR2W1Q9Y3N9 320 aa10.22□□□□□ -0.77
CHRNA1-205ENST00000409542 PGLYRP1O75594 196 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 SLC25A6P12236 298 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 ZNF44P15621 663 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 VDAC1P21796 283 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 NKX2-1P43699 371 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 ZNF146Q15072 292 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 LRRC10Q5BKY1 277 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 ZNF788Q6ZQV5 615 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 OR10J5Q8NHC4 309 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 WIPF2Q8TF74 440 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 R3HDM4Q96D70 268 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 BSCL2Q96G97 398 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 TSNAXQ99598 290 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 CITED2Q99967 270 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 SEC11CQ9BY50 192 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 SMIM3Q9BZL3 60 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 HRH4Q9H3N8 390 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 ZNF702PQ9H963 129 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 WFDC1Q9HC57 220 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 PLA2G2EQ9NZK7 142 aa10.21□□□□□ -0.78
CHRNA1-205ENST00000409542 TENM3Q9P273 2699 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 M0R1W7 72 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 SLC33A1O00400 549 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 HSD17B6O14756 317 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 SH2D1BO14796 132 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 TSPAN4O14817 238 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 FBXO24O75426 580 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 OR2H2O95918 312 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 SPP1P10451 314 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 IGLL1P15814 213 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 ADCYAP1P18509 176 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 RAB5CP51148 216 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 EWSR1Q01844 656 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 MZT1Q08AG7 82 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 LRRC75BQ2VPJ9 315 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 C5orf24Q7Z6I8 188 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 OR2C3Q8N628 320 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 OR10V1Q8NGI7 309 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 AKR1E2Q96JD6 320 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 SLC25A31Q9H0C2 315 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 TLNRD1Q9H1K6 362 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 HES4Q9HCC6 221 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 TREM1Q9NP99 234 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 UQCC1Q9NVA1 299 aa10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 SLC25A10Q9UBX3 287 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 STRAPQ9Y3F4 350 aaKnown RBP10.2□□□□□ -0.78
CHRNA1-205ENST00000409542 PITX3O75364 302 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 NXPH2O95156 264 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 NDUFB7P17568 137 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 F2RP25116 425 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 ERVFRD-1P60508 538 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 SRSF3P84103 164 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 ID3Q02535 119 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 HMGN3Q15651 99 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 Q6ZRG5 221 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 Q6ZS46 218 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 DYNAPQ8N1N2 210 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 PLPPR1Q8TBJ4 325 aa10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 MBNL3Q9NUK0 354 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-205ENST00000409542 F8W036 122 aa10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 SIGLEC5O15389 551 aa10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 CD5P06127 495 aa10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 RAB13P51153 203 aa10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 NDUFA11Q86Y39 141 aa10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 PUSL1Q8N0Z8 303 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 C11orf42Q8N5U0 333 aa10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 FAM234AQ9H0X4 552 aa10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
CHRNA1-205ENST00000409542 A0A1B0GU03 582 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 SIRPB1O00241 398 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 SNAPINO95295 136 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 LMO1P25800 156 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 AKR1C2P52895 323 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 KRTAP10-11P60412 298 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 VAMP2P63027 116 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 NHLH2Q02577 135 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 AKR1C1Q04828 323 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 BAXQ07812 192 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 ZNF266Q14584 549 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 LHFPL4Q7Z7J7 247 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 Q8N2B8 174 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 ZNRF1Q8ND25 227 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 LSM10Q969L4 123 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 NPFFR1Q9GZQ6 430 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 TRAPPC2LQ9UL33 140 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 IGKV1D-17A0A075B6S4 117 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 WI2-2373I1.2A0A1W2PRP0 233 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 NKX6-3A6NJ46 265 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 FAM74A7A6NL05 159 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 SSSCA1O60232 199 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 HAND1O96004 215 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 ATF4P18848 351 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 GABRA2P47869 451 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 POLR2GP62487 172 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 GUCA2BQ16661 112 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 FAM74A3Q4VXF1 159 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms