RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PSMB3P49720 205 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 MUC21Q5SSG8 566 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 MRPL14Q6P1L8 145 aaKnown RBP13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 ERRFI1Q9UJM3 462 aaPredicted RBP13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 EML6Q6ZMW3 1958 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 CNTRLQ7Z7A1 2325 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 M0R1X1 148 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 WNT2P09544 360 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 SSR4P51571 173 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 GPM6AP51674 278 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 RAB30Q15771 203 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 UFSP1Q6NVU6 142 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 HAPLN4Q86UW8 402 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 C5orf30Q96GV9 206 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 OR4C12Q96R67 309 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 JPT1Q9UK76 154 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 FRYLO94915 3013 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 NUDT3O95989 172 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 AESQ08117 197 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 SPATA31B1PQ5VZV4 182 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 MRPL30Q8TCC3 161 aaKnown RBP13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 TAF15Q92804 592 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 RAB1CQ92928 201 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 ANAPC16Q96DE5 110 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 WDYHV1Q96HA8 205 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 MTCH1Q9NZJ7 389 aa13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 ASCC3Q8N3C0 2202 aaKnown RBP13.61□□□□□ -0.23
COL4A3BP-204ENST00000405807 IL3RAP26951 378 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 ADMP35318 185 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 GABRA6Q16445 453 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 CD300EQ496F6 205 aaPredicted RBP13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 ZNF784Q8NCA9 323 aaPredicted RBP13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 OR4A5Q8NH83 315 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 AKIRIN1Q9H9L7 192 aaPredicted RBP13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 IL36RNQ9UBH0 155 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 DMDP11532 3685 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 ABCA7Q8IZY2 2146 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 LOC102723996A0A087X1L8 192 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 TRBV6-6A0A0A6YYG2 114 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 C1QTNF9P0C862 333 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 BVES-AS1Q5T3Y7 98 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 TIMM9Q9Y5J7 89 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 MUC3AQ02505 3323 aa13.6□□□□□ -0.23
COL4A3BP-204ENST00000405807 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 DPRXA6NFQ7 191 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 LRRC3CA6NJW4 275 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 IGKV1-39P01597 117 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 IGKV1D-39P04432 117 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 RPL32P62910 135 aaKnown RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 SPANXN5Q5MJ07 72 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 BAGE3Q86Y29 109 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 BAGE2Q86Y30 109 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 ZDHHC23Q8IYP9 409 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 RPP25LQ8N5L8 163 aaKnown RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 OR10V1Q8NGI7 309 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 REPIN1Q9BWE0 567 aaKnown RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 LINC00470Q9BZP3 86 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 UBE2ZQ9H832 354 aaPredicted RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 SH2D2AQ9NP31 389 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 TSSC4Q9Y5U2 329 aaPredicted RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 A0A0G2JMM0 328 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 A0A1W2PPB8 328 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 KIR3DP1A8MWS1 328 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 ZNF253O75346 499 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 LCN2P80188 198 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 LINC00596Q86U02 117 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 IGHV1-45A0A0A0MS14 117 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 SRP14P37108 136 aaKnown RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 RPL24P83731 157 aaKnown RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 KCNIP4Q6PIL6 250 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 C20orf204Q6ZNR8 217 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 STRADBQ9C0K7 418 aa13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 FGF23Q9GZV9 251 aaPredicted RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 FNDC4Q9H6D8 234 aaPredicted RBP13.59□□□□□ -0.23
COL4A3BP-204ENST00000405807 IGHV5-10-1A0A0J9YXX1 117 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 CXCL13O43927 109 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 SLC38A11Q08AI6 406 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR5A2Q8NGI9 324 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 IMMP1LQ96LU5 166 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 HARBI1Q96MB7 349 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 WDR54Q9H977 334 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 CABIN1Q9Y6J0 2220 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 WDFY4Q6ZS81 3184 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 UBE2L5PA0A1B0GUS4 154 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 IGKV1-5P01602 117 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 TESK1Q15569 626 aa13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 YRDCQ86U90 279 aaKnown RBP13.58□□□□□ -0.24
COL4A3BP-204ENST00000405807 HS3ST1O14792 307 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 GPX1P07203 203 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 CRISP2P16562 243 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 CCL7P80098 99 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 NRN1Q9NPD7 142 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 CTXND1A0A1B0GTU2 59 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 A0A1W2PQM1 296 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 CD5LO43866 347 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 CLDN1O95832 211 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms