RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 KCTD12Q96CX2 325 aaKnown RBP10.2□□□□□ -0.78
SDF4-203ENST00000403997 FYTTD1Q96QD9 318 aaKnown RBP10.2□□□□□ -0.78
SDF4-203ENST00000403997 AIFM2Q9BRQ8 373 aa10.2□□□□□ -0.78
SDF4-203ENST00000403997 AKIP1Q9NQ31 210 aa10.2□□□□□ -0.78
SDF4-203ENST00000403997 COMMD3Q9UBI1 195 aa10.2□□□□□ -0.78
SDF4-203ENST00000403997 DPPA5A6NC42 116 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 FAM223BA6NKX1 122 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 TRIM64CA6NLI5 447 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 PMP2P02689 132 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 PRSS3P35030 304 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 MAS1LP35410 378 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 RFX2P48378 723 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 VBP1P61758 197 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 CATR1Q13166 79 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 RPEL1Q2QD12 228 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 DHRS11Q6UWP2 260 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 HAPLN4Q86UW8 402 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 TMEM17Q86X19 198 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 FAM223AQ8IWN6 122 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 OR9G4Q8NGQ1 327 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 OR5H2Q8NGV7 314 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 OR51H1Q8NH63 302 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 HRASLSQ9HDD0 168 aa10.19□□□□□ -0.78
SDF4-203ENST00000403997 TRBV9A0A0B4J1U6 114 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 SMIM31A0A1B0GVY4 71 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 TEX22C9J3V5 150 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 E7EUB6 86 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 OR2J3O76001 311 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 EIF4EP06730 217 aaKnown RBP10.18□□□□□ -0.78
SDF4-203ENST00000403997 IL6RP08887 468 aaPredicted RBP10.18□□□□□ -0.78
SDF4-203ENST00000403997 GNRHRP30968 328 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 TAS2R46P59540 309 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 RPL8P62917 257 aaKnown RBP10.18□□□□□ -0.78
SDF4-203ENST00000403997 ZNF45Q02386 682 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 EXOSC2Q13868 293 aaKnown RBP10.18□□□□□ -0.78
SDF4-203ENST00000403997 AADACL3Q5VUY0 350 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 ZNF818PQ6ZRF7 136 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 NECAP1Q8NC96 275 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 OR4A5Q8NH83 315 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 ZNF2Q9BSG1 426 aaPredicted RBP10.18□□□□□ -0.78
SDF4-203ENST00000403997 SLC2A9Q9NRM0 540 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 ADAM30Q9UKF2 790 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 ZNF257Q9Y2Q1 563 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 U3KQK5 164 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 COL7A1Q02388 2944 aa10.18□□□□□ -0.78
SDF4-203ENST00000403997 RBFOX2O43251 390 aaKnown RBP eCLIP10.17□□□□□ -0.782e-6■■□□□ 13.5
SDF4-203ENST00000403997 HPRT1P00492 218 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 IGLV1-51P01701 117 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 ZNF735P0CB33 412 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 MYOD1P15172 320 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 HLA-GP17693 338 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 NAT1P18440 290 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 OR4A47Q6IF82 309 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 IL34Q6ZMJ4 242 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 CD300LFQ8TDQ1 290 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 BORCS5Q969J3 196 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 WWC2-AS2Q96NR7 200 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 BET1LQ9NYM9 111 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 ANAPC10Q9UM13 185 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
SDF4-203ENST00000403997 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.16□□□□□ -0.78
SDF4-203ENST00000403997 A0A1B0GW64 132 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 NPIPB5A8MRT5 1133 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 PGLYRP1O75594 196 aaPredicted RBP10.16□□□□□ -0.78
SDF4-203ENST00000403997 APOA1P02647 267 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 AREGP15514 252 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 RPA2P15927 270 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 NQO2P16083 231 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 HLA-DMAP28067 261 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 RORCP51449 518 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 TAS2R31P59538 309 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 C15orf32Q32M92 178 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 C19orf35Q6ZS72 473 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 SNX29P2Q8IUI4 249 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 LYSMD2Q8IV50 215 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 DMBX1Q8NFW5 382 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 OR6F1Q8NGZ6 308 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 MOB3AQ96BX8 217 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 CMTM3Q96MX0 182 aa10.16□□□□□ -0.78
SDF4-203ENST00000403997 TRAV3A0A0B4J244 114 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 H0Y980 276 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 BMPR1BO00238 502 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 HPGDSO60760 199 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 DHFRP00374 187 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 CSN3P07498 182 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 DEFA4P12838 97 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 PSMB6P28072 239 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 HRH1P35367 487 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 TSPAN5P62079 268 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 GPX8Q8TED1 209 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 FANCD2OSQ96PS1 177 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 PLEKHA2Q9HB19 425 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 PEMTQ9UBM1 199 aa10.15□□□□□ -0.78
SDF4-203ENST00000403997 FAM25AB3EWG3 89 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 FAM25CB3EWG5 89 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 FAM25GB3EWG6 89 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 UPK2O00526 184 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 S1PR2O95136 353 aa10.14□□□□□ -0.79
SDF4-203ENST00000403997 NDUFB8O95169 186 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms