RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KBTBD11O94819 623 aa26.4■■□□□ 1.82
CSNK1E-204ENST00000403904 DHFRP00374 187 aa26.4■■□□□ 1.82
CSNK1E-204ENST00000403904 IL5P05113 134 aa26.4■■□□□ 1.82
CSNK1E-204ENST00000403904 C9orf152Q5JTZ5 239 aa26.4■■□□□ 1.82
CSNK1E-204ENST00000403904 SLC35G3Q8N808 338 aa26.4■■□□□ 1.82
CSNK1E-204ENST00000403904 IL22RA2Q969J5 263 aa26.4■■□□□ 1.82
CSNK1E-204ENST00000403904 RPL15P61313 204 aaKnown RBP26.39■■□□□ 1.82
CSNK1E-204ENST00000403904 MRGPRG-AS1Q2M3A8 158 aa26.39■■□□□ 1.82
CSNK1E-204ENST00000403904 LYZL2Q7Z4W2 148 aa26.39■■□□□ 1.82
CSNK1E-204ENST00000403904 ZNF431Q8TF32 576 aaPredicted RBP26.39■■□□□ 1.82
CSNK1E-204ENST00000403904 BET1LQ9NYM9 111 aa26.39■■□□□ 1.82
CSNK1E-204ENST00000403904 TRAV3A0A0B4J244 114 aa26.38■■□□□ 1.81
CSNK1E-204ENST00000403904 ATG12O94817 140 aa26.38■■□□□ 1.81
CSNK1E-204ENST00000403904 RELBQ01201 579 aa26.38■■□□□ 1.81
CSNK1E-204ENST00000403904 H2BFWTQ7Z2G1 175 aa26.38■■□□□ 1.81
CSNK1E-204ENST00000403904 RANBP3Q9H6Z4 567 aaPredicted RBP26.38■■□□□ 1.81
CSNK1E-204ENST00000403904 HLA-DRB1P01911 266 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 IZUMO4Q1ZYL8 232 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 LRTM2Q8N967 370 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 COQ8AQ8NI60 647 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 RNASE11Q8TAA1 199 aaKnown RBP26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 TMEM167AQ8TBQ9 72 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 MITD1Q8WV92 249 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 RRNAD1Q96FB5 475 aaKnown RBP26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 HSPB9Q9BQS6 159 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 ZNF430Q9H8G1 570 aaPredicted RBP26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 PRAF2O60831 178 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 CA2P00918 260 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 IL6RP08887 468 aaPredicted RBP26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 PRSS8Q16651 343 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 CHPT1Q8WUD6 406 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 PRSS22Q9GZN4 317 aa26.37■■□□□ 1.81
CSNK1E-204ENST00000403904 A0A0B4J2A0 478 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 A0A0G2JRQ6 117 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 OR9G9P0C7N8 305 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 Q6ZSV7 163 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 PHB2Q99623 299 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 ZNF702PQ9H963 129 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 SHPKQ9UHJ6 478 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 NSG2Q9Y328 171 aa26.36■■□□□ 1.81
CSNK1E-204ENST00000403904 UPK2O00526 184 aa26.35■■□□□ 1.81
CSNK1E-204ENST00000403904 OR4A5Q8NH83 315 aa26.35■■□□□ 1.81
CSNK1E-204ENST00000403904 GPN1Q9HCN4 374 aaPredicted RBP26.35■■□□□ 1.81
CSNK1E-204ENST00000403904 MMP24Q9Y5R2 645 aa26.35■■□□□ 1.81
CSNK1E-204ENST00000403904 A0A0B4J293 547 aa26.34■■□□□ 1.81
CSNK1E-204ENST00000403904 P0C879 139 aa26.34■■□□□ 1.81
CSNK1E-204ENST00000403904 GNB1P62873 340 aa26.34■■□□□ 1.81
CSNK1E-204ENST00000403904 TATDN3Q17R31 274 aa26.34■■□□□ 1.81
CSNK1E-204ENST00000403904 IGHV7-81A0A0B4J1V7 117 aa26.33■■□□□ 1.81
CSNK1E-204ENST00000403904 LINC01548A6NM66 108 aa26.33■■□□□ 1.81
CSNK1E-204ENST00000403904 CX3CL1P78423 397 aa26.33■■□□□ 1.81
CSNK1E-204ENST00000403904 MMD2Q8IY49 270 aa26.33■■□□□ 1.81
CSNK1E-204ENST00000403904 CADM3Q8N126 398 aa26.33■■□□□ 1.81
CSNK1E-204ENST00000403904 UXS1Q8NBZ7 420 aa26.33■■□□□ 1.81
CSNK1E-204ENST00000403904 HOXB5P09067 269 aa26.33■■□□□ 1.8
CSNK1E-204ENST00000403904 VDAC1P21796 283 aa26.33■■□□□ 1.8
CSNK1E-204ENST00000403904 RPL8P62917 257 aaKnown RBP26.33■■□□□ 1.8
CSNK1E-204ENST00000403904 SSBP2P81877 361 aaPredicted RBP26.33■■□□□ 1.8
CSNK1E-204ENST00000403904 MINDY2Q8NBR6 621 aa26.33■■□□□ 1.8
CSNK1E-204ENST00000403904 CREBL2O60519 120 aaPredicted RBP26.32■■□□□ 1.8
CSNK1E-204ENST00000403904 TSPAN9O75954 239 aa26.32■■□□□ 1.8
CSNK1E-204ENST00000403904 TNXAQ16473 311 aa26.32■■□□□ 1.8
CSNK1E-204ENST00000403904 ZNF562Q6V9R5 426 aa26.32■■□□□ 1.8
CSNK1E-204ENST00000403904 C12orf45Q8N5I9 185 aaPredicted RBP26.32■■□□□ 1.8
CSNK1E-204ENST00000403904 LSM10Q969L4 123 aaKnown RBP26.32■■□□□ 1.8
CSNK1E-204ENST00000403904 GPR146Q96CH1 333 aa26.32■■□□□ 1.8
CSNK1E-204ENST00000403904 PIGBOS1A0A0B4J2F0 54 aa26.31■■□□□ 1.8
CSNK1E-204ENST00000403904 ADAP1O75689 374 aa26.31■■□□□ 1.8
CSNK1E-204ENST00000403904 SNAPC5O75971 98 aa26.31■■□□□ 1.8
CSNK1E-204ENST00000403904 IGHG2P01859 326 aa26.31■■□□□ 1.8
CSNK1E-204ENST00000403904 MYOD1P15172 320 aa26.31■■□□□ 1.8
CSNK1E-204ENST00000403904 Q6ZRM9 215 aa26.31■■□□□ 1.8
CSNK1E-204ENST00000403904 FAM219AQ8IW50 185 aa26.31■■□□□ 1.8
CSNK1E-204ENST00000403904 ATRQ13535 2644 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 DUXBA0A1W2PPF3 345 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 SNRPGP15A8MWD9 76 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 ACTL6BO94805 426 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 CNIH1O95406 144 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 OR2B8PP59922 312 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 NDPQ00604 133 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 TMEM95Q3KNT9 176 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 ARSJQ5FYB0 599 aaPredicted RBP26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 NMSQ5H8A3 153 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 SLC35E3Q7Z769 313 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 Q8N2B8 174 aa26.3■■□□□ 1.8
CSNK1E-204ENST00000403904 DBX1A6NMT0 343 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 HLA-GP17693 338 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 FXYD3Q14802 87 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 C10orf55Q5SWW7 151 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 OR4A16Q8NH70 328 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 OR51J1Q9H342 316 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 TET2Q6N021 2002 aaPredicted RBP26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 OPN1MWP04001 364 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 OPN1MW2P0DN77 364 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 OPN1MW3P0DN78 364 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 TMED3Q9Y3Q3 217 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 ALG5Q9Y673 324 aa26.29■■□□□ 1.8
CSNK1E-204ENST00000403904 RBMXL2O75526 392 aaKnown RBP26.28■■□□□ 1.8
CSNK1E-204ENST00000403904 GGNBP1Q5YKI7 109 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms