RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 HAPLN4Q86UW8 402 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 TMEM17Q86X19 198 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 CROCCP3Q8IVE0 287 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 TEX45Q8NA69 505 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR5AP2Q8NGF4 316 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 OSR1Q8TAX0 266 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 SRSF12Q8WXF0 261 aaKnown RBP4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 RHOVQ96L33 236 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 PHB2Q99623 299 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 HSD17B10Q99714 261 aaKnown RBP4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 SLC5A7Q9GZV3 580 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 IFT46Q9NQC8 304 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 COA4Q9NYJ1 87 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 EHFQ9NZC4 300 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 MRPS7Q9Y2R9 242 aaKnown RBP4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 PRELID3BQ9Y3B1 194 aa4.44□□□□□ -1.7
HMGB1P20-201ENST00000402555 C13orf42A0A1B0GVH6 325 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 A0A1B0GW64 132 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 HMX3A6NHT5 357 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 E7EUB6 86 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 SULT1C2O00338 296 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 MPPED1O15442 326 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 HPGDSO60760 199 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 RAMP3O60896 148 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 SLC22A5O76082 557 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 LY86O95711 162 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 TRBV12-3P01733 135 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 HSPB1P04792 205 aaKnown RBP4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR9G9P0C7N8 305 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 RPA2P15927 270 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 ELK1P19419 428 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 HLA-DMAP28067 261 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 CBX5P45973 191 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 DYRK1AQ13627 763 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 CTF1Q16619 201 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 GPR107Q5VW38 600 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF66Q6ZN08 573 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF818PQ6ZRF7 136 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 SNX29P2Q8IUI4 249 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 SPAG16Q8N0X2 631 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 ADAD2Q8NCV1 583 aaKnown RBP4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR51H1Q8NH63 302 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR4S2Q8NH73 311 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 FYTTD1Q96QD9 318 aaKnown RBP4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 TINAGL1Q9GZM7 467 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 SLA2Q9H6Q3 261 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 ADAM30Q9UKF2 790 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 ANAPC10Q9UM13 185 aa4.43□□□□□ -1.7
HMGB1P20-201ENST00000402555 TRAV3A0A0B4J244 114 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 TEX22C9J3V5 150 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 H3BUA1 57 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 TMEM127O75204 238 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 ACTL6BO94805 426 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 KBTBD11O94819 623 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR2A4O95047 310 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 S1PR2O95136 353 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 GABARAPO95166 117 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 APOA1P02647 267 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 IL6RP08887 468 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 AREGP15514 252 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 SPNP16150 400 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 GNRHRP30968 328 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 PRSS3P35030 304 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 HRH1P35367 487 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 KIR2DS2P43631 304 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 RPL27AP46776 148 aaKnown RBP4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 HERV-K104P61576 105 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 RHOGP84095 191 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF45Q02386 682 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 CD69Q07108 199 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 AADACL3Q5VUY0 350 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR4A47Q6IF82 309 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF429Q86V71 674 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 ANKRD13BQ86YJ7 626 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 LYSMD2Q8IV50 215 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 MMD2Q8IY49 270 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 PUSL1Q8N0Z8 303 aaKnown RBP4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR5H2Q8NGV7 314 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 TMEM167AQ8TBQ9 72 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 GPX8Q8TED1 209 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 GIMAP1Q8WWP7 306 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 TMEM68Q96MH6 324 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR2A7Q96R45 310 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 SPIN2AQ99865 258 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 ASCL2Q99929 193 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 SPIN2BQ9BPZ2 258 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF2Q9BSG1 426 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 FXYD6Q9H0Q3 95 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 RANGRFQ9HD47 186 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF256Q9Y2P7 627 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 LSM4Q9Y4Z0 139 aaKnown RBP4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 S4R3C0 116 aa4.42□□□□□ -1.7
HMGB1P20-201ENST00000402555 A0A0G2JLM5 398 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 SMIM31A0A1B0GVY4 71 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 CGB1A6NKQ9 187 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 FAM25AB3EWG3 89 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 FAM25CB3EWG5 89 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 FAM25GB3EWG6 89 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms