RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
ATG4B-203ENST00000400772 LYSMD2Q8IV50 215 aa12.13□□□□□ -0.47
ATG4B-203ENST00000400772 SPAG16Q8N0X2 631 aa12.13□□□□□ -0.47
ATG4B-203ENST00000400772 VSTM2AQ8TAG5 236 aa12.13□□□□□ -0.47
ATG4B-203ENST00000400772 NAA50Q9GZZ1 169 aaKnown RBP12.13□□□□□ -0.47
ATG4B-203ENST00000400772 AKIP1Q9NQ31 210 aa12.13□□□□□ -0.47
ATG4B-203ENST00000400772 IFT46Q9NQC8 304 aa12.13□□□□□ -0.47
ATG4B-203ENST00000400772 COMMD3Q9UBI1 195 aa12.13□□□□□ -0.47
ATG4B-203ENST00000400772 HRASP01112 189 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 ZNF735P0CB33 412 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 GP9P14770 177 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 MYOD1P15172 320 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 PRSS3P35030 304 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 RHOGP84095 191 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 C19orf35Q6ZS72 473 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 OR6Q1Q8NGQ2 317 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 CMTM3Q96MX0 182 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 OR4C12Q96R67 309 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 EHFQ9NZC4 300 aa12.12□□□□□ -0.47
ATG4B-203ENST00000400772 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 RBFOX2O43251 390 aaKnown RBP eCLIP12.11□□□□□ -0.477e-8■■■□□ 15.7
ATG4B-203ENST00000400772 IGLV1-51P01701 117 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 MAS1LP35410 378 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 RPL27AP46776 148 aaKnown RBP12.11□□□□□ -0.47
ATG4B-203ENST00000400772 SYNJ2BPP57105 145 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 ATP5G2Q06055 141 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 CTF1Q16619 201 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 OR9G4Q8NGQ1 327 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 GPX8Q8TED1 209 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 ZNF2Q9BSG1 426 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-203ENST00000400772 ELOVL1Q9BW60 279 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 SLC2A9Q9NRM0 540 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 BET1LQ9NYM9 111 aa12.11□□□□□ -0.47
ATG4B-203ENST00000400772 KMT2CQ8NEZ4 4911 aaKnown RBP12.1□□□□□ -0.47
ATG4B-203ENST00000400772 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 NPIPB5A8MRT5 1133 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 HPRT1P00492 218 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 APOA1P02647 267 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 CRYGCP07315 174 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 NHLRC4P0CG21 123 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-203ENST00000400772 AREGP15514 252 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 ELK1P19419 428 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 TAS2R31P59538 309 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 HERV-K104P61576 105 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
ATG4B-203ENST00000400772 POU2AF1Q16633 256 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 ANKRD13BQ86YJ7 626 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 OR51H1Q8NH63 302 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 MOB3AQ96BX8 217 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 FYTTD1Q96QD9 318 aaKnown RBP12.1□□□□□ -0.47
ATG4B-203ENST00000400772 ASCL2Q99929 193 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 ZNF257Q9Y2Q1 563 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 DMRT1Q9Y5R6 373 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 SMAD5-AS1Q9Y6J3 95 aa12.1□□□□□ -0.47
ATG4B-203ENST00000400772 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.09□□□□□ -0.47
ATG4B-203ENST00000400772 BMPR1BO00238 502 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 HPGDSO60760 199 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 PGLYRP1O75594 196 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-203ENST00000400772 OR2J3O76001 311 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 GABARAPO95166 117 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 CSN3P07498 182 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 HLA-GP17693 338 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 HLA-DMAP28067 261 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 HRH1P35367 487 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 RORCP51449 518 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 TAS2R46P59540 309 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 CATR1Q13166 79 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 EXOSC2Q13868 293 aaKnown RBP12.09□□□□□ -0.47
ATG4B-203ENST00000400772 KLK9Q2XQG4 91 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 AADACL3Q5VUY0 350 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 SLC25A42Q86VD7 318 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 NECAP1Q8NC96 275 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 OR5H2Q8NGV7 314 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 KLK9Q9UKQ9 250 aa12.09□□□□□ -0.47
ATG4B-203ENST00000400772 UPK2O00526 184 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 S1PR2O95136 353 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 NQO2P16083 231 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 CTRB1P17538 263 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 PSMB6P28072 239 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 RPEL1Q2QD12 228 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 C15orf32Q32M92 178 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 CTRB2Q6GPI1 263 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 SNX29P2Q8IUI4 249 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 AIFM2Q9BRQ8 373 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 FXYD6Q9H0Q3 95 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 PLEKHA2Q9HB19 425 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 HRASLSQ9HDD0 168 aa12.08□□□□□ -0.48
ATG4B-203ENST00000400772 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
ATG4B-203ENST00000400772 NDUFB8O95169 186 aa12.07□□□□□ -0.48
ATG4B-203ENST00000400772 RLN1P04808 185 aa12.07□□□□□ -0.48
ATG4B-203ENST00000400772 MECP2P51608 486 aaKnown RBP12.07□□□□□ -0.48
ATG4B-203ENST00000400772 OR2B8PP59922 312 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms