RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 WNK1Q9H4A3 2382 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 IGHV3OR16-10A0A075B7F0 116 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 SHOXO15266 292 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 HRASP01112 189 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 IGKV1-5P01602 117 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 IGKV1-16P04430 117 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 SAA4P35542 130 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 NMSQ5H8A3 153 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 LDLRAD2Q5SZI1 272 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 H2BFWTQ7Z2G1 175 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 FAM219AQ8IW50 185 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 OR4C13Q8NGP0 309 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 MMP24Q9Y5R2 645 aa10.64□□□□□ -0.71
SEC13-209ENST00000397117 PRKDCP78527 4128 aaKnown RBP10.63□□□□□ -0.71
SEC13-209ENST00000397117 IGHV3-72A0A0B4J1Y9 119 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 DNAJC9-AS1A6NH13 148 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 TIMM23O14925 209 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 FGL1Q08830 312 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 KLF17Q5JT82 389 aaPredicted RBP10.63□□□□□ -0.71
SEC13-209ENST00000397117 RBMS3Q6XE24 437 aaKnown RBP10.63□□□□□ -0.71
SEC13-209ENST00000397117 SSX9Q7RTT3 188 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 BCL6BQ8N143 479 aaPredicted RBP10.63□□□□□ -0.71
SEC13-209ENST00000397117 OSR1Q8TAX0 266 aaPredicted RBP10.63□□□□□ -0.71
SEC13-209ENST00000397117 GPR146Q96CH1 333 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 WDR89Q96FK6 387 aaPredicted RBP10.63□□□□□ -0.71
SEC13-209ENST00000397117 HYLS1Q96M11 299 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 DUX5Q96PT3 197 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 NUP50Q9UKX7 468 aa10.63□□□□□ -0.71
SEC13-209ENST00000397117 A0A1B0GU03 582 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 SLC25A6P12236 298 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 RPS16P62249 146 aaKnown RBP10.62□□□□□ -0.71
SEC13-209ENST00000397117 SMCO1Q147U7 214 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 LRRC37A5PQ49AS3 106 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 PIP4P2Q8N4L2 257 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 OR1S1Q8NH92 325 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 PPP1R1CQ8WVI7 109 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 HARBI1Q96MB7 349 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 ZNF48Q96MX3 618 aaPredicted RBP10.62□□□□□ -0.71
SEC13-209ENST00000397117 SLA2Q9H6Q3 261 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 CACNG5Q9UF02 275 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 A0A0G2JRQ6 117 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 RBMXL2O75526 392 aaKnown RBP10.62□□□□□ -0.71
SEC13-209ENST00000397117 SNAPC5O75971 98 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 SCGB1D2O95969 90 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 RNASE1P07998 156 aaKnown RBP10.62□□□□□ -0.71
SEC13-209ENST00000397117 IGHV4-38-2P0DP08 117 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 CD1BP29016 333 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 S100A10P60903 97 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 IZUMO4Q1ZYL8 232 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 TMEM177Q53S58 311 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 Q5BKY6 102 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 RUSC1-AS1Q66K80 236 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 BRD3OSQ6XYD6 125 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 VKORC1L1Q8N0U8 176 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 OR11H4Q8NGC9 324 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 C17orf50Q8WW18 174 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 RHOVQ96L33 236 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 MS4A7Q9GZW8 240 aaPredicted RBP10.62□□□□□ -0.71
SEC13-209ENST00000397117 FAM96BQ9Y3D0 163 aa10.62□□□□□ -0.71
SEC13-209ENST00000397117 FAM90A9PA6NNJ1 464 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 CLDN34H7C241 214 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 PET100P0DJ07 73 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 PSMB6P28072 239 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 BRS3P32247 399 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 OR4A16Q8NH70 328 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 ZFP57Q9NU63 452 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 TMEM140Q9NV12 185 aa10.61□□□□□ -0.71
SEC13-209ENST00000397117 P0C879 139 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 S100A1P23297 94 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 PAX6P26367 422 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 LGALS7P47929 136 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 BPIFB3P59826 476 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 HES1Q14469 280 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 POU2AF1Q16633 256 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 LAMTOR1Q6IAA8 161 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 OR4A47Q6IF82 309 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 Q6ZRM9 215 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 FOXRED2Q8IWF2 684 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 DYNAPQ8N1N2 210 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 OR4D5Q8NGN0 318 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 THAP6Q8TBB0 222 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 TAF15Q92804 592 aaKnown RBP eCLIP10.6□□□□□ -0.71
SEC13-209ENST00000397117 RBMXL1Q96E39 390 aaKnown RBP10.6□□□□□ -0.71
SEC13-209ENST00000397117 GON7Q9BXV9 100 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.6□□□□□ -0.71
SEC13-209ENST00000397117 COA4Q9NYJ1 87 aa10.6□□□□□ -0.71
SEC13-209ENST00000397117 SRRM4A7MD48 611 aaKnown RBP10.59□□□□□ -0.71
SEC13-209ENST00000397117 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 MPC2O95563 127 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 MOSP00540 346 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 IGKV1D-33P01593 117 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 IGKV1-33P01594 117 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 RLN2P04090 185 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 NKX2-1P43699 371 aaPredicted RBP10.59□□□□□ -0.71
SEC13-209ENST00000397117 RAB32Q13637 225 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 HABP2Q14520 560 aaPredicted RBP10.59□□□□□ -0.71
SEC13-209ENST00000397117 VMA21Q3ZAQ7 101 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 C9orf62Q8N4C0 152 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms