RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PF4P02776 101 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 GAPDHP04406 335 aaKnown RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 BRS3P32247 399 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 DUTP33316 252 aaKnown RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 KIR2DS2P43631 304 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF137PP52743 207 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 RRAS2P62070 204 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 TAGLNQ01995 201 aaKnown RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 EIF4EBP1Q13541 118 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 SP6Q3SY56 376 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 KHDC1LQ5JSQ8 128 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 LIN54Q6MZP7 749 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 C16orf82Q7Z2V1 217 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 TGIF2LXQ8IUE1 241 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF695Q8IW36 515 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 CADM3Q8N126 398 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 LGI3Q8N145 548 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 RPEQ96AT9 228 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 NOL4LQ96MY1 436 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 TP53RKQ96S44 253 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 GPHA2Q96T91 129 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF251Q9BRH9 671 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 TMEM222Q9H0R3 208 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 FAM212BQ9NTI7 297 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-202ENST00000396828 SHPKQ9UHJ6 478 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 LINC00527Q9UJ94 153 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 HMX3A6NHT5 357 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 LINC01548A6NM66 108 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 FAM90A9PA6NNJ1 464 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 ATG12O94817 140 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 IFNA21P01568 189 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 APOA2P02652 100 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 TRAPPC2P0DI81 140 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 TRAPPC2BP0DI82 140 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 RRASP10301 218 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 RPA2P15927 270 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 UCP1P25874 307 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 EGFEM1PQ0D2K5 195 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 TMEM187Q14656 261 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 RTL8BQ17RB0 113 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 SPAG16Q8N0X2 631 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 DRAXINQ8NBI3 349 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-202ENST00000396828 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 GLYATL2Q8WU03 294 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 IL22RA2Q969J5 263 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 ST6GALNAC6Q969X2 333 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 C5orf30Q96GV9 206 aa8.14□□□□□ -1.11
NEDD8-202ENST00000396828 DYNC2H1Q8NCM8 4307 aaKnown RBP8.14□□□□□ -1.11
NEDD8-202ENST00000396828 DUXBA0A1W2PPF3 345 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 A0A1W2PPI3 338 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 LINC00473A8K010 186 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 OOSP1A8MZH6 123 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 RBFOX2O43251 390 aaKnown RBP eCLIP8.13□□□□□ -1.11
NEDD8-202ENST00000396828 PFDN1O60925 122 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 FCGR3BO75015 233 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 PROP1O75360 226 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 CDS2O95674 445 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 SNRNP70P08621 437 aaKnown RBP8.13□□□□□ -1.11
NEDD8-202ENST00000396828 CT45A6P0DMU7 189 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 CT45A5P0DMU8 189 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 CT45A7P0DMV0 189 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 MC5RP33032 325 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 LPAR6P43657 344 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 REG1BP48304 166 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 ARHGDIBP52566 201 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 RPL30P62888 115 aaKnown RBP8.13□□□□□ -1.11
NEDD8-202ENST00000396828 ZNF816Q0VGE8 651 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-202ENST00000396828 HNF4GQ14541 408 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 ANKRD55Q3KP44 614 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 OR2B11Q5JQS5 317 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 TMEM268Q5VZI3 342 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 CCDC144NLQ6NUI1 221 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 C8orf86Q6ZUL3 223 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 LRTM2Q8N967 370 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 OR4S2Q8NH73 311 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 CHAC2Q8WUX2 184 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 RBPMSQ93062 196 aaKnown RBP8.13□□□□□ -1.11
NEDD8-202ENST00000396828 RCC1LQ96I51 464 aaKnown RBP8.13□□□□□ -1.11
NEDD8-202ENST00000396828 TMEM56Q96MV1 263 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 PRR13Q9NZ81 148 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 MGAT4CQ9UBM8 478 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 TMEM56-RWDD3S4R434 201 aa8.13□□□□□ -1.11
NEDD8-202ENST00000396828 IGHV1-3A0A0C4DH29 117 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 PSMB11A5LHX3 300 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 DBX1A6NMT0 343 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 H7C2Y5 167 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 GOSR2O14653 212 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 HPRT1P00492 218 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 SULT1A3P0DMM9 295 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 SULT1A4P0DMN0 295 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 RPL23AP62750 156 aaKnown RBP8.12□□□□□ -1.11
NEDD8-202ENST00000396828 FCN2Q15485 313 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 GSG1LQ6UXU4 331 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 MOB3BQ86TA1 216 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 AKAP14Q86UN6 197 aa8.12□□□□□ -1.11
NEDD8-202ENST00000396828 SELENOHQ8IZQ5 122 aaKnown RBP8.12□□□□□ -1.11
NEDD8-202ENST00000396828 OR8H3Q8N146 312 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms