RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 HAGHQ16775 308 aa12.24□□□□□ -0.45
CBX3-202ENST00000396386 MBD3L1Q8WWY6 194 aa12.24□□□□□ -0.45
CBX3-202ENST00000396386 LOC105371267A0A1B0GV96 52 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 APOA2P02652 100 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 PPOXP50336 477 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 ERVFRD-1P60508 538 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 TFF3Q07654 80 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 ICAM4Q14773 271 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 ZNF726P1Q15940 193 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 C8orf31Q8N9H6 132 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 OR13D1Q8NGV5 346 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 TMEM204Q9BSN7 226 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 PRORYQ9H606 182 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 TMEM14BQ9NUH8 114 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 TRBV23-1A0A0A0MS06 115 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 TMEM155Q4W5P6 130 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 ZNF709Q8N972 641 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 NPCDR1Q9BY65 106 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 MRPL20Q9BYC9 149 aaKnown RBP12.23□□□□□ -0.45
CBX3-202ENST00000396386 UNKLQ9H9P5 680 aaKnown RBP12.23□□□□□ -0.45
CBX3-202ENST00000396386 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
CBX3-202ENST00000396386 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 MAP1LC3B2A6NCE7 125 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 C17orf112F2Z3M2 114 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 MBP02144 154 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 HSPB1P04792 205 aaKnown RBP12.22□□□□□ -0.45
CBX3-202ENST00000396386 DLX6P56179 175 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 ACSM6Q6P461 480 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 LCN15Q6UWW0 184 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 LINC00311Q8N616 119 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 AIFM2Q9BRQ8 373 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 MAP1LC3BQ9GZQ8 125 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
CBX3-202ENST00000396386 POLEQ07864 2286 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 FSTL3O95633 263 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 SRP19P09132 144 aaKnown RBP12.21□□□□□ -0.45
CBX3-202ENST00000396386 MDKP21741 143 aaPredicted RBP12.21□□□□□ -0.45
CBX3-202ENST00000396386 HSPE1P61604 102 aaKnown RBP12.21□□□□□ -0.45
CBX3-202ENST00000396386 RAB11AP62491 216 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 LY6DQ14210 128 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 KHDC3LQ587J8 217 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 AWAT1Q58HT5 328 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 FFAR4Q5NUL3 377 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 ETV3LQ6ZN32 361 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 OR10X1Q8NGY0 326 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 ZNF596Q8TC21 504 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 RXFP4Q8TDU9 374 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 GGACTQ9BVM4 153 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 GNG13Q9P2W3 67 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 WDR83OSQ9Y284 106 aa12.21□□□□□ -0.45
CBX3-202ENST00000396386 M0R036 132 aa12.21□□□□□ -0.46
CBX3-202ENST00000396386 IGKV1-16P04430 117 aa12.21□□□□□ -0.46
CBX3-202ENST00000396386 CD1BP29016 333 aa12.21□□□□□ -0.46
CBX3-202ENST00000396386 HNF4GQ14541 408 aa12.21□□□□□ -0.46
CBX3-202ENST00000396386 AKIRIN2Q53H80 203 aa12.21□□□□□ -0.46
CBX3-202ENST00000396386 OSR1Q8TAX0 266 aaPredicted RBP12.21□□□□□ -0.46
CBX3-202ENST00000396386 OR51B2Q9Y5P1 312 aa12.21□□□□□ -0.46
CBX3-202ENST00000396386 A0A087X0M5 115 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 A0A1B0GX30 115 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 J3QR06 171 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 UPK2O00526 184 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 RRHO14718 337 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 IFNA1P01562 189 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 IGKV1D-33P01593 117 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 IGKV1-33P01594 117 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 IGHV2-70P01814 119 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 BCL2P10415 239 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
CBX3-202ENST00000396386 DLK1P80370 383 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 TMEM186Q96B77 213 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 BET1LQ9NYM9 111 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 ZNF257Q9Y2Q1 563 aa12.2□□□□□ -0.46
CBX3-202ENST00000396386 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 PRSS46E5RG02 174 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 LYNX1G3V0Z9 82 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 H0YJW9 148 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 H7C2Y5 167 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 MPDU1O75352 247 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 IL6RP08887 468 aaPredicted RBP12.19□□□□□ -0.46
CBX3-202ENST00000396386 IGHV1-8P0DP01 117 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 LYNX1P0DP58 116 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 NPY1RP25929 384 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 RHEBQ15382 184 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 RPP25LQ8N5L8 163 aaKnown RBP12.19□□□□□ -0.46
CBX3-202ENST00000396386 OR5AN1Q8NGI8 311 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 HARBI1Q96MB7 349 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 RPS10P5Q9NQ39 176 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 SLC39A9Q9NUM3 307 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 ZFP92A6NM28 416 aa12.19□□□□□ -0.46
CBX3-202ENST00000396386 SOX15O60248 233 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms