RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MINDY2Q8NBR6 621 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 ADAD2Q8NCV1 583 aaKnown RBP12.99□□□□□ -0.33
CXCL1-201ENST00000395761 OR4X2Q8NGF9 303 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 OR4S2Q8NH73 311 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 TMEM230Q96A57 120 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 C20orf85Q9H1P6 137 aa12.99□□□□□ -0.33
CXCL1-201ENST00000395761 FAM212BQ9NTI7 297 aaPredicted RBP12.99□□□□□ -0.33
CXCL1-201ENST00000395761 VWFP04275 2813 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 PKD1L1Q8TDX9 2849 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 A0A1W2PRX2 142 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 CRYM-AS1A6NIL9 109 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 B3GALNT1O75752 331 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 RLN1P04808 185 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 H2AFB2P0C5Z0 115 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 SAA1P0DJI8 122 aaPredicted RBP12.98□□□□□ -0.33
CXCL1-201ENST00000395761 VDAC1P21796 283 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 F2RP25116 425 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 TAS2R31P59538 309 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 SLC35B1P78383 322 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 CATR1Q13166 79 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 VMA21Q3ZAQ7 101 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 TMEM128Q5BJH2 165 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 ZNF562Q6V9R5 426 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 LCNL1Q6ZST4 164 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 TBC1D26Q86UD7 250 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 NDUFA11Q86Y39 141 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 TEX45Q8NA69 505 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 FAM103A1Q9BTL3 118 aaKnown RBP12.98□□□□□ -0.33
CXCL1-201ENST00000395761 NUDT15Q9NV35 164 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 ZNF580Q9UK33 172 aa12.98□□□□□ -0.33
CXCL1-201ENST00000395761 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
CXCL1-201ENST00000395761 TRAV41A0A0B4J266 112 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 SPNP16150 400 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 KIR2DS2P43631 304 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 GNB1P62873 340 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 FXYD3Q14802 87 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 ECSCRQ19T08 205 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 C2orf68Q2NKX9 166 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 ABHD5Q8WTS1 349 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 GALNT14Q96FL9 552 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 GON7Q9BXV9 100 aa12.97□□□□□ -0.33
CXCL1-201ENST00000395761 TRAV6A0A075B6T7 132 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
CXCL1-201ENST00000395761 RBFOX2O43251 390 aaKnown RBP eCLIP12.96□□□□□ -0.33
CXCL1-201ENST00000395761 CNIH1O95406 144 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 IL5P05113 134 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 AKR1C4P17516 323 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 PPIFP30405 207 aaKnown RBP12.96□□□□□ -0.33
CXCL1-201ENST00000395761 PRSS8Q16651 343 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 C19orf54Q5BKX5 351 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 KHDC1LQ5JSQ8 128 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 TEX38Q6PEX7 206 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 TMED4Q7Z7H5 227 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 SGPP2Q8IWX5 399 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 GRPEL2Q8TAA5 225 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 CD300LFQ8TDQ1 290 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 NAA60Q9H7X0 242 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 ZNF430Q9H8G1 570 aaPredicted RBP12.96□□□□□ -0.33
CXCL1-201ENST00000395761 KCNIP3Q9Y2W7 256 aa12.96□□□□□ -0.33
CXCL1-201ENST00000395761 TSSC4Q9Y5U2 329 aaPredicted RBP12.96□□□□□ -0.33
CXCL1-201ENST00000395761 C3orf85A0A1B0GTC6 90 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 INMT-MINDY4F8WBC2 141 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 HPRT1P00492 218 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 IGHG4P01861 327 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 OPN1MWP04001 364 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 RPLP1P05386 114 aaKnown RBP12.95□□□□□ -0.34
CXCL1-201ENST00000395761 OPN1MW2P0DN77 364 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 OPN1MW3P0DN78 364 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 CRIP2P52943 208 aaPredicted RBP12.95□□□□□ -0.34
CXCL1-201ENST00000395761 SUPT4H1P63272 117 aaKnown RBP12.95□□□□□ -0.34
CXCL1-201ENST00000395761 TRIM16LQ309B1 348 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 TREML4Q6UXN2 200 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 C18orf65Q6ZTR6 163 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 SSX9Q7RTT3 188 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 PUSL1Q8N0Z8 303 aaKnown RBP12.95□□□□□ -0.34
CXCL1-201ENST00000395761 COMMD1Q8N668 190 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 LFNGQ8NES3 379 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
CXCL1-201ENST00000395761 ARPC1AQ92747 370 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 RHOVQ96L33 236 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 KLK15Q9H2R5 256 aa12.95□□□□□ -0.34
CXCL1-201ENST00000395761 H0Y980 276 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 SOX15O60248 233 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 OR2A4O95047 310 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 S1PR2O95136 353 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 SFT2D2O95562 160 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 HRASP01112 189 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 ELANEP08246 267 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 OR4E1P0C645 316 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 ANXA7P20073 488 aaKnown RBP12.94□□□□□ -0.34
CXCL1-201ENST00000395761 LPAR6P43657 344 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 RPL23AP62750 156 aaKnown RBP12.94□□□□□ -0.34
CXCL1-201ENST00000395761 FOXE3Q13461 319 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 UNQ5815/PRO19632Q6UWF5 114 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 RNF152Q8N8N0 203 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 OR2A7Q96R45 310 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 TP53RKQ96S44 253 aa12.94□□□□□ -0.34
CXCL1-201ENST00000395761 WNK1Q9H4A3 2382 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms