RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZNF256Q9Y2P7 627 aaPredicted RBP8.83□□□□□ -1
COL4A6-203ENST00000394872 C7orf66A4D0T2 115 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 ZNF98A6NK75 572 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 KLF4O43474 513 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 HSPB1P04792 205 aaKnown RBP8.83□□□□□ -1
COL4A6-203ENST00000394872 LHFPL5Q8TAF8 219 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 SGK494Q96LW2 274 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 LOC390937A0A1W2PQ73 354 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 PCP4P48539 62 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 TNFSF10P50591 281 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 DPM3Q9P2X0 92 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 S4R3C0 116 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 IGHV3-49A0A0A0MS15 119 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 IGHV2OR16-5A0A0B4J2B6 119 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 RAMP1O60894 148 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 CD69Q07108 199 aa8.83□□□□□ -1
COL4A6-203ENST00000394872 C1orf162Q8NEQ5 155 aaPredicted RBP8.83□□□□□ -1
COL4A6-203ENST00000394872 C1QL1O75973 258 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 TRGC1P0CF51 173 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 CDKN1AP38936 164 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 HSPB9Q9BQS6 159 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 MRPL32Q9BYC8 188 aaKnown RBP8.82□□□□□ -1
COL4A6-203ENST00000394872 FBXL15Q9H469 300 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 KLK2P20151 261 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 IGHV1-2P23083 117 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 UQCRFS1P47985 274 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 ASPHD2Q6ICH7 369 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 GOLT1AQ6ZVE7 132 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 LINC00305Q7Z4B0 112 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 SLC25A38Q96DW6 304 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 AKIRIN1Q9H9L7 192 aaPredicted RBP8.82□□□□□ -1
COL4A6-203ENST00000394872 KNTC1P50748 2209 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 PLXNA1Q9UIW2 1896 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 CRYBB3P26998 211 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 LTBRP36941 435 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 MRPL18Q9H0U6 180 aaKnown RBP8.82□□□□□ -1
COL4A6-203ENST00000394872 KLK15Q9H2R5 256 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 RP1L1Q8IWN7 2480 aaPredicted RBP8.82□□□□□ -1
COL4A6-203ENST00000394872 MEIG1Q5JSS6 88 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 RTN4RL2Q86UN3 420 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 PPP1R27Q86WC6 154 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 ZNF418Q8TF45 676 aaPredicted RBP8.82□□□□□ -1
COL4A6-203ENST00000394872 SPSB4Q96A44 273 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 NRIP2Q9BQI9 281 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 NRXN2Q9P2S2 1712 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 C9JCJ5 164 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 K7ERU9 68 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 TM4SF5O14894 197 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 ZNF708P17019 499 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
COL4A6-203ENST00000394872 NABP2Q9BQ15 211 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
COL4A6-203ENST00000394872 C5orf66Q9H5L9 145 aa8.82□□□□□ -1
COL4A6-203ENST00000394872 A0A0G2JLM5 398 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 HLA-DQA1P01909 254 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 MBNL2Q5VZF2 373 aaKnown RBP8.81□□□□□ -1
COL4A6-203ENST00000394872 FBXL7Q9UJT9 491 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 LOC107984156A0A0G2JMH3 177 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 EIF3GO75821 320 aaKnown RBP eCLIP8.81□□□□□ -1
COL4A6-203ENST00000394872 ARL17AQ8IVW1 177 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 RNASE6Q93091 150 aaKnown RBP8.81□□□□□ -1
COL4A6-203ENST00000394872 SMIM8Q96KF7 97 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 C19orf24Q9BVV8 132 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 RBFOX2O43251 390 aaKnown RBP eCLIP8.81□□□□□ -1
COL4A6-203ENST00000394872 CEACAM4O75871 244 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 RPS11P62280 158 aaKnown RBP eCLIP8.81□□□□□ -1
COL4A6-203ENST00000394872 TMEM187Q14656 261 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 CYP2G1PQ6ZSU1 146 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 FAM216BQ8N7L0 139 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 COPS9Q8WXC6 57 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 GEMIN7Q9H840 131 aaKnown RBP8.81□□□□□ -1
COL4A6-203ENST00000394872 NPIPB13A6NJU9 1138 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 NPIPB4C9JG80 1138 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 SCGB1A1P11684 91 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 SH3BGRL3Q9H299 93 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 TAF1LQ8IZX4 1826 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 MTCL1Q9Y4B5 1905 aaKnown RBP8.81□□□□□ -1
COL4A6-203ENST00000394872 PIN1P1O15428 100 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 SPATA45Q537H7 98 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 C9orf106Q8NAJ2 232 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 WDYHV1Q96HA8 205 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 CCDC88CQ9P219 2028 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 EFEMP2O95967 443 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 RARRES2Q99969 163 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 GPR61Q9BZJ8 451 aa8.81□□□□□ -1
COL4A6-203ENST00000394872 LINC01590Q5TEZ4 76 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 ARPC1AQ92747 370 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 HIST1H4GQ99525 98 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 FOXA2Q9Y261 457 aaPredicted RBP8.8□□□□□ -1
COL4A6-203ENST00000394872 LEPROTL1O95214 131 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 OR4A47Q6IF82 309 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 H0YL77 283 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 IGLV3-19P01714 112 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 LY6DQ14210 128 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 CLDND2Q8NHS1 167 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 DUX3Q96PT4 197 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 KIR2DL4Q99706 377 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 LRRC37AA6NMS7 1700 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 TCF24Q7RTU0 167 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 TMEM101Q96IK0 257 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms