RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SOD3P08294 240 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 MMP9P14780 707 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 NDUFB7P17568 137 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 GZMHP20718 246 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 COL8A2P25067 703 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 ZNF616Q08AN1 781 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 GAGE1Q13065 139 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 GAMTQ14353 236 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 AKIRIN2Q53H80 203 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 LYPD2Q6UXB3 125 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 C1orf87Q8N0U7 546 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 OR5D13Q8NGL4 314 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 OR51H1Q8NH63 302 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 Q8WTZ3 238 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 NINJ1Q92982 152 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 GNPNAT1Q96EK6 184 aaPredicted RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 RHOVQ96L33 236 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 NIPSNAP3BQ9BS92 247 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 CTDSP1Q9GZU7 261 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 UBE2J1Q9Y385 318 aaPredicted RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 AKAP6Q13023 2319 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 PIGBOS1A0A0B4J2F0 54 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 M0QZK8 103 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 ADAM20O43506 726 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 GGCTO75223 188 aaKnown RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 LY86O95711 162 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 OPN1MWP04001 364 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 SRP19P09132 144 aaKnown RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 OPN1MW2P0DN77 364 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 OPN1MW3P0DN78 364 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 TAGLN2P37802 199 aaKnown RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 ERVFRD-1P60508 538 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 UBE2KP61086 200 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 SRPXP78539 464 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 PAX5Q02548 391 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 PMS2P11Q13670 270 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 HAGHQ16775 308 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 ZNF674Q2M3X9 581 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 UTF1Q5T230 341 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 AKR1C8PQ5T2L2 129 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 GGNBP1Q5YKI7 109 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 TMEM183AQ8IXX5 376 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 FAM185AQ8N0U4 392 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 LEAP2Q969E1 77 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 RAB39BQ96DA2 213 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 MSI2Q96DH6 328 aaKnown RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 PACRGQ96M98 296 aaPredicted RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 OR6C3Q9NZP0 311 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 GNG12Q9UBI6 72 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 VAX2Q9UIW0 290 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 LAMP3Q9UQV4 416 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 DYSFO75923 2080 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 ARFGEF3Q5TH69 2177 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 DCHS2Q6V1P9 2916 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 DOPEY1Q5JWR5 2465 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 USF3Q68DE3 2245 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 TRGV10A0A0A0MS01 117 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 NKX6-3A6NJ46 265 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 CLDN34H7C241 214 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 PHOX2AO14813 284 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 PITX3O75364 302 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 FCN3O75636 299 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 DFFBO76075 338 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 CDS2O95674 445 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 PRH1P02810 166 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 METTL15P1P0C7V9 234 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 DAOP14920 347 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 F2RP25116 425 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 RND3P61587 244 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 FOXRED2Q8IWF2 684 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 LGI3Q8N145 548 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 ZNF843Q8N446 348 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 DRAM1Q8N682 238 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 SLC35G3Q8N808 338 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 ACY3Q96HD9 319 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 C18orf12Q96KH6 178 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 HIST1H2BLQ99880 126 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 SLC25A31Q9H0C2 315 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 TMEM222Q9H0R3 208 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 FAM234AQ9H0X4 552 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 OR2D2Q9H210 308 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 CBLN4Q9NTU7 201 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 CALYQ9NYX4 217 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 SLC25A10Q9UBX3 287 aaPredicted RBP5.72□□□□□ -1.49
RTN4-205ENST00000394609 PSG11Q9UQ72 335 aa5.72□□□□□ -1.49
RTN4-205ENST00000394609 PUS1Q9Y606 427 aaKnown RBP eCLIP5.72□□□□□ -1.49
RTN4-205ENST00000394609 KBTBD11-OT1A0A1B0GTJ5 212 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 PPP5D1E7EU14 171 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 ST8SIA3O43173 380 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 CGB3P0DN86 165 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 CGB7P0DN87 165 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 S100GP29377 79 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 PDLIM4P50479 330 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 LOXL3P58215 753 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 LINC00205P59089 165 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 HTD2P86397 168 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 BAXQ07812 192 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 C17orf58Q2M2W7 97 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 CR1LQ2VPA4 569 aa5.71□□□□□ -1.5
RTN4-205ENST00000394609 TRAT1Q6PIZ9 186 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms