RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 ISOC2Q96AB3 205 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 YPEL2Q96QA6 119 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 TRBV6-7A0A0A0MS04 114 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 NPPCP23582 126 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 ZNF343Q6P1L6 599 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 GGNQ86UU5 652 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 ZIC4Q8N9L1 334 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 ZNF738Q8NE65 137 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 MGAMO43451 1857 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 TSPOP30536 169 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 FCGR2BP31994 310 aaPredicted RBP12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 CA7P43166 264 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 IER3P46695 156 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 EFNB1P98172 346 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 ZNF880Q6PDB4 577 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 Q6ZN92 141 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 SDHCQ99643 169 aaPredicted RBP12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 HSPB7Q9UBY9 170 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 CACNG8Q8WXS5 425 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 SPTBN2O15020 2390 aa12.18□□□□□ -0.46
PPARGC1B-203ENST00000394320 A0A0G2JLM5 398 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 PINLYPA6NC86 204 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 MFAP2P55001 183 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 Q1RN00 199 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 IBA57Q5T440 356 aaKnown RBP12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 NABP2Q9BQ15 211 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 FUT9Q9Y231 359 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 M0R143 59 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 TCAPO15273 167 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 CSN3P07498 182 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 MST1P26927 711 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 CXorf65A6NEN9 183 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 TMEM250H0YL14 139 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 RBFOX2O43251 390 aaKnown RBP eCLIP12.17□□□□□ -0.461e-9■□□□□ 10.9
PPARGC1B-203ENST00000394320 CELA3BP08861 270 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 MPZP25189 248 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 MAS1LP35410 378 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 RPL13AP40429 203 aaKnown RBP12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 VAMP3Q15836 100 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 RPL39P5Q59GN2 51 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
PPARGC1B-203ENST00000394320 HLA-DQA1P01909 254 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 KIR2DL2P43627 348 aaPredicted RBP12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 IFI27L2Q9H2X8 130 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 SRSF7Q16629 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 MDS2Q8NDY4 140 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 MGPP08493 103 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 RNASEH2CQ8TDP1 164 aaKnown RBP12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 TBR1Q16650 682 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 TNFRSF14Q92956 283 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 GPHA2Q96T91 129 aa12.16□□□□□ -0.46
PPARGC1B-203ENST00000394320 EFNA2O43921 213 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 CA2P00918 260 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 WDR82Q6UXN9 313 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 IGHV1-18A0A0C4DH31 117 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 C1QL1O75973 258 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 GCSHP23434 173 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 MRPL37Q9BZE1 423 aaKnown RBP12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 IGKV1-9A0A0C4DH69 117 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 J3KRW8 73 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 CLPSP04118 112 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 OR4A47Q6IF82 309 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 DDB2Q92466 427 aa12.15□□□□□ -0.46
PPARGC1B-203ENST00000394320 MOSP00540 346 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 C2orf68Q2NKX9 166 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 MBNL2Q5VZF2 373 aaKnown RBP12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 ZNF385CQ66K41 422 aaPredicted RBP12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 SLC25A28Q96A46 364 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 LYZL4Q96KX0 146 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 H0YL77 283 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 M0QZK8 103 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 ZNF137PP52743 207 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 LY6EQ16553 131 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 GUCA2BQ16661 112 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 NHLRC3Q5JS37 347 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 SAPCD1Q5SSQ6 148 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 SAMD13Q5VXD3 122 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 ZNF497Q6ZNH5 498 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 SMIM6P0DI80 62 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 ARL14EPLP0DKL9 152 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 NAT1P18440 290 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 GAS1P54826 345 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 CENPVQ7Z7K6 275 aaPredicted RBP12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 OR10S1Q8NGN2 331 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 RTBDNQ9BSG5 229 aaPredicted RBP12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 FAM209BQ5JX69 171 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 HIST1H2BAQ96A08 127 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 RTTNQ86VV8 2226 aa12.14□□□□□ -0.47
PPARGC1B-203ENST00000394320 TMSB15BA0A087X1C1 80 aa12.13□□□□□ -0.47
PPARGC1B-203ENST00000394320 HTN1P15515 57 aa12.13□□□□□ -0.47
PPARGC1B-203ENST00000394320 TUSC1Q2TAM9 212 aa12.13□□□□□ -0.47
PPARGC1B-203ENST00000394320 OR11H4Q8NGC9 324 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms