RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 ENSAO43768 121 aaKnown RBP9.15□□□□□ -0.94
TCOF1-203ENST00000394269 TSPAN9O75954 239 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 ARG1P05089 322 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 COL8A2P25067 703 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 CA7P43166 264 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 RAB11AP62491 216 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 DIAPH2-AS1Q14236 149 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 OR4S2Q8NH73 311 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 ZNF714Q96N38 554 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 TMPRSS5Q9H3S3 457 aa9.15□□□□□ -0.94
TCOF1-203ENST00000394269 CSMD1Q96PZ7 3565 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 OR8U8P0C7N1 319 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 CHRNB4P30926 498 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 LRRC75BQ2VPJ9 315 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 AWAT1Q58HT5 328 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 SSX7Q7RTT5 188 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 DMRTC2Q8IXT2 367 aaPredicted RBP9.15□□□□□ -0.95
TCOF1-203ENST00000394269 LHX4Q969G2 390 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 ENY2Q9NPA8 101 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 SLC35D1Q9NTN3 355 aa9.15□□□□□ -0.95
TCOF1-203ENST00000394269 NDUFA2O43678 99 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 CGB3P0DN86 165 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 CGB7P0DN87 165 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 CYB561D1Q8N8Q1 229 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 RAB9BQ9NP90 201 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 COA4Q9NYJ1 87 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 CARHSP1Q9Y2V2 147 aaKnown RBP9.14□□□□□ -0.95
TCOF1-203ENST00000394269 ZNF729A6NN14 1252 aaPredicted RBP9.14□□□□□ -0.95
TCOF1-203ENST00000394269 FAM90A26D6RGX4 464 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 GCSAMLQ5JQS6 135 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 FFAR4Q5NUL3 377 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 OR4A47Q6IF82 309 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 TMEM14EPQ6UXP3 125 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 CIB3Q96Q77 187 aaPredicted RBP9.14□□□□□ -0.95
TCOF1-203ENST00000394269 CTSZQ9UBR2 303 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 MLXQ9UH92 298 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 RPUSD1Q9UJJ7 312 aaKnown RBP9.14□□□□□ -0.95
TCOF1-203ENST00000394269 KPTNQ9Y664 436 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 DOPEY1Q5JWR5 2465 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 APELAP0DMC3 54 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 ZNF674Q2M3X9 581 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 LYPD6BQ8NI32 183 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 RCC1LQ96I51 464 aaKnown RBP9.14□□□□□ -0.95
TCOF1-203ENST00000394269 DIRC2Q96SL1 478 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 GAL3ST2Q9H3Q3 398 aa9.14□□□□□ -0.95
TCOF1-203ENST00000394269 C7orf77A4D0Y5 90 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 FCN3O75636 299 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 LFNGQ8NES3 379 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 OR13D1Q8NGV5 346 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 C2CD4CQ8TF44 421 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 SSMEM1Q8WWF3 244 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 PINX1Q96BK5 328 aaKnown RBP9.13□□□□□ -0.95
TCOF1-203ENST00000394269 PATZ1Q9HBE1 687 aaKnown RBP9.13□□□□□ -0.95
TCOF1-203ENST00000394269 URGCP-MRPS24S4R325 110 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 MAP1LC3B2A6NCE7 125 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 CT45A6P0DMU7 189 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 CT45A5P0DMU8 189 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 CT45A7P0DMV0 189 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 TEX36Q5VZQ5 186 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 MRPL20Q9BYC9 149 aaKnown RBP9.13□□□□□ -0.95
TCOF1-203ENST00000394269 MAP1LC3BQ9GZQ8 125 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 TOLLIPQ9H0E2 274 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 TCF19Q9Y242 345 aa9.13□□□□□ -0.95
TCOF1-203ENST00000394269 SRRM4A7MD48 611 aaKnown RBP9.12□□□□□ -0.95
TCOF1-203ENST00000394269 SIAH2O43255 324 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 IGKV1D-33P01593 117 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 IGKV1-33P01594 117 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 P0C879 139 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 COX7A1P24310 79 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 RELBQ01201 579 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 ACSM6Q6P461 480 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 RPP25LQ8N5L8 163 aaKnown RBP9.12□□□□□ -0.95
TCOF1-203ENST00000394269 OR10G4Q8NGN3 311 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 OR10G9Q8NGN4 311 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 OR10G7Q8NGN6 311 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 TMEM147Q9BVK8 224 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 LINC00312Q9Y6C7 94 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 A0A1W2PRD5 423 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 A0A1W2PRF3 423 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 A0A1W2PRM7 423 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 IGHV3-48P01763 117 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 COMMD1Q8N668 190 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 OR5T1Q8NG75 326 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 ZNF251Q9BRH9 671 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 A0A1W2PPE2 198 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 C15orf62A8K5M9 175 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 B9A039 149 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 FAM157AC9JC47 383 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 WNT2P09544 360 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 PAX6P26367 422 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 CD1BP29016 333 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 THBS3P49746 956 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 SPCS3P61009 180 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 ADORA2A-AS1P86434 159 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 RTL8BQ17RB0 113 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 CR1LQ2VPA4 569 aa9.12□□□□□ -0.95
TCOF1-203ENST00000394269 TCTEX1D1Q8N7M0 179 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms