RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 HSPE1P61604 102 aaKnown RBP18.04■□□□□ 0.48
HMGA2-203ENST00000393578 DIAPH2-AS1Q14236 149 aa18.04■□□□□ 0.48
HMGA2-203ENST00000393578 TUSC1Q2TAM9 212 aa18.04■□□□□ 0.48
HMGA2-203ENST00000393578 TMEM177Q53S58 311 aa18.04■□□□□ 0.48
HMGA2-203ENST00000393578 PDPNQ86YL7 162 aa18.04■□□□□ 0.48
HMGA2-203ENST00000393578 TGIF2LXQ8IUE1 241 aa18.04■□□□□ 0.48
HMGA2-203ENST00000393578 CLEC7AQ9BXN2 247 aa18.04■□□□□ 0.48
HMGA2-203ENST00000393578 HEYLQ9NQ87 328 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-203ENST00000393578 C22orf46C9J442 243 aa18.03■□□□□ 0.48
HMGA2-203ENST00000393578 GPR6P46095 362 aaPredicted RBP18.03■□□□□ 0.48
HMGA2-203ENST00000393578 OR4C13Q8NGP0 309 aa18.03■□□□□ 0.48
HMGA2-203ENST00000393578 LHX4Q969G2 390 aa18.03■□□□□ 0.48
HMGA2-203ENST00000393578 FLYWCH2Q96CP2 140 aaKnown RBP18.03■□□□□ 0.48
HMGA2-203ENST00000393578 SSBP3Q9BWW4 388 aaPredicted RBP18.03■□□□□ 0.48
HMGA2-203ENST00000393578 BET1LQ9NYM9 111 aa18.03■□□□□ 0.48
HMGA2-203ENST00000393578 C15orf62A8K5M9 175 aa18.02■□□□□ 0.48
HMGA2-203ENST00000393578 UPK2O00526 184 aa18.02■□□□□ 0.48
HMGA2-203ENST00000393578 TSPAN15O95858 294 aa18.02■□□□□ 0.48
HMGA2-203ENST00000393578 PUSL1Q8N0Z8 303 aaKnown RBP18.02■□□□□ 0.48
HMGA2-203ENST00000393578 BEND2Q8NDZ0 799 aa18.02■□□□□ 0.48
HMGA2-203ENST00000393578 FAM213BQ8TBF2 198 aa18.02■□□□□ 0.48
HMGA2-203ENST00000393578 PSMG3Q9BT73 122 aaPredicted RBP18.02■□□□□ 0.48
HMGA2-203ENST00000393578 WDR61Q9GZS3 305 aaKnown RBP18.02■□□□□ 0.48
HMGA2-203ENST00000393578 NDUFS7O75251 213 aa18.02■□□□□ 0.47
HMGA2-203ENST00000393578 HLA-DRB5Q30154 266 aa18.02■□□□□ 0.47
HMGA2-203ENST00000393578 COMMD1Q8N668 190 aa18.02■□□□□ 0.47
HMGA2-203ENST00000393578 RBMXL1Q96E39 390 aaKnown RBP18.02■□□□□ 0.47
HMGA2-203ENST00000393578 HARBI1Q96MB7 349 aa18.02■□□□□ 0.47
HMGA2-203ENST00000393578 TMEM147Q9BVK8 224 aa18.02■□□□□ 0.47
HMGA2-203ENST00000393578 ZNF257Q9Y2Q1 563 aa18.02■□□□□ 0.47
HMGA2-203ENST00000393578 WASHC3Q9Y3C0 194 aa18.02■□□□□ 0.47
HMGA2-203ENST00000393578 MC5RP33032 325 aa18.01■□□□□ 0.47
HMGA2-203ENST00000393578 RAB13P51153 203 aa18.01■□□□□ 0.47
HMGA2-203ENST00000393578 AKR1C8PQ5T2L2 129 aa18.01■□□□□ 0.47
HMGA2-203ENST00000393578 DPPA3Q6W0C5 159 aa18.01■□□□□ 0.47
HMGA2-203ENST00000393578 NARS2Q96I59 477 aaKnown RBP18.01■□□□□ 0.47
HMGA2-203ENST00000393578 BBC3Q96PG8 261 aaPredicted RBP18.01■□□□□ 0.47
HMGA2-203ENST00000393578 ONECUT1Q9UBC0 465 aa18.01■□□□□ 0.47
HMGA2-203ENST00000393578 OR51B2Q9Y5P1 312 aa18.01■□□□□ 0.47
HMGA2-203ENST00000393578 IFNA10P01566 189 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 SAA1P0DJI8 122 aaPredicted RBP18■□□□□ 0.47
HMGA2-203ENST00000393578 HOXA1P49639 335 aaPredicted RBP18■□□□□ 0.47
HMGA2-203ENST00000393578 TAF15Q92804 592 aaKnown RBP eCLIP18■□□□□ 0.475e-6■□□□□ 9.1
HMGA2-203ENST00000393578 RSG1Q9BU20 258 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 NARFLQ9H6Q4 476 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 UQCC1Q9NVA1 299 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 FKBP11Q9NYL4 201 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 FBXO7Q9Y3I1 522 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 LOC105371242A0A075B767 164 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 UBE2L5PA0A1B0GUS4 154 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 OVOL3O00110 214 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 PRB1P04280 392 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 SRSF3P84103 164 aaKnown RBP18■□□□□ 0.47
HMGA2-203ENST00000393578 VWC2Q2TAL6 325 aa18■□□□□ 0.47
HMGA2-203ENST00000393578 BUB1B-PAK6H3BSN5 160 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 KBTBD11O94819 623 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 DLX1P56177 255 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 SERF2P84101 59 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 AKR1C1Q04828 323 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 TET2Q6N021 2002 aaPredicted RBP17.99■□□□□ 0.47
HMGA2-203ENST00000393578 TMEM218A2RU14 115 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 AGPAT2O15120 278 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 ENY2Q9NPA8 101 aa17.99■□□□□ 0.47
HMGA2-203ENST00000393578 M0R1W7 72 aa17.98■□□□□ 0.47
HMGA2-203ENST00000393578 SNCAP37840 140 aa17.98■□□□□ 0.47
HMGA2-203ENST00000393578 Q8N7P7 452 aa17.98■□□□□ 0.47
HMGA2-203ENST00000393578 VSTM2AQ8TAG5 236 aa17.98■□□□□ 0.47
HMGA2-203ENST00000393578 AMMECR1Q9Y4X0 333 aaPredicted RBP17.98■□□□□ 0.47
HMGA2-203ENST00000393578 TIMM9Q9Y5J7 89 aa17.98■□□□□ 0.47
HMGA2-203ENST00000393578 DOPEY1Q5JWR5 2465 aa17.98■□□□□ 0.47
HMGA2-203ENST00000393578 RPS16P62249 146 aaKnown RBP17.97■□□□□ 0.47
HMGA2-203ENST00000393578 PRCDQ00LT1 54 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 CENPVQ7Z7K6 275 aaPredicted RBP17.97■□□□□ 0.47
HMGA2-203ENST00000393578 OR5B3Q8NH48 314 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 OR4A5Q8NH83 315 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 MS4A7Q9GZW8 240 aaPredicted RBP17.97■□□□□ 0.47
HMGA2-203ENST00000393578 TREM1Q9NP99 234 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 CD5P06127 495 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 COX7A1P24310 79 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 TLE4Q04727 773 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 LFNGQ8NES3 379 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 OR4P4Q8NGL7 312 aa17.97■□□□□ 0.47
HMGA2-203ENST00000393578 KLF2Q9Y5W3 355 aaPredicted RBP17.97■□□□□ 0.47
HMGA2-203ENST00000393578 RNASEK-C17orf49H0YIS7 233 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 RRHO14718 337 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 H2AFB1P0C5Y9 115 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 USF1P22415 310 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-203ENST00000393578 DVL1P1P54792 670 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-203ENST00000393578 ARF6P62330 175 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 RAB11AP62491 216 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 PRB3Q04118 309 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-203ENST00000393578 ETV3LQ6ZN32 361 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 GGACTQ9BVM4 153 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 TMEM231Q9H6L2 316 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 FAM96BQ9Y3D0 163 aa17.96■□□□□ 0.47
HMGA2-203ENST00000393578 FLNCQ14315 2725 aa17.95■□□□□ 0.46
HMGA2-203ENST00000393578 TEX50A0A1B0GTY4 177 aa17.95■□□□□ 0.46
HMGA2-203ENST00000393578 PNKDQ8N490 385 aa17.95■□□□□ 0.46
HMGA2-203ENST00000393578 TMEM167AQ8TBQ9 72 aa17.95■□□□□ 0.46
HMGA2-203ENST00000393578 PLEKHA3Q9HB20 300 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms