RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 PPP5D1E7EU14 171 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 CREBL2O60519 120 aaPredicted RBP13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 ZNF735P0CB33 412 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 HAGHQ16775 308 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 TATDN3Q17R31 274 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 BEST4Q8NFU0 473 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 OR4S2Q8NH73 311 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 FANCD2OSQ96PS1 177 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 OR2A7Q96R45 310 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 GAR1Q9NY12 217 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 ZNF257Q9Y2Q1 563 aa13.81□□□□□ -0.2
PDLIM7-205ENST00000393551 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 TNFSF12O43508 249 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 HLA-AP01891 365 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 AREGP15514 252 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 FCGR2CP31995 323 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 SCAND1P57086 179 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 IDNKQ5T6J7 187 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 LCN12Q6JVE5 192 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 ZNF66Q6ZN08 573 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 HOGA1Q86XE5 327 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 Q8N402 240 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 SLC2A9Q9NRM0 540 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 ETV7Q9Y603 341 aa13.8□□□□□ -0.2
PDLIM7-205ENST00000393551 LOC100506127A0A0U1RQW1 187 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 ZNF785A8K8V0 405 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 NPIPB5A8MRT5 1133 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 FCER2P06734 321 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 LYL1P12980 280 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 RPL27AP46776 148 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 KLK9Q2XQG4 91 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 CD300EQ496F6 205 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 OR13F1Q8NGS4 319 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 SECTM1Q8WVN6 248 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 CCDC140Q96MF4 163 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 FYTTD1Q96QD9 318 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 AUNIPQ9H7T9 357 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 PEMTQ9UBM1 199 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 KLK9Q9UKQ9 250 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 S4R3C0 116 aa13.79□□□□□ -0.2
PDLIM7-205ENST00000393551 NDUFB8O95169 186 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 PPYP01298 95 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 IGHV3-23P01764 117 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 CRYGCP07315 174 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 TGFBR1P36897 503 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 NEDD8Q15843 81 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 LINC00322Q6ZN03 302 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 SLC25A42Q86VD7 318 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 VSTM2AQ8TAG5 236 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 FBXL7Q9UJT9 491 aa13.78□□□□□ -0.2
PDLIM7-205ENST00000393551 AIREO43918 545 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 OR2C1O95371 312 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 PSMB6P28072 239 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 MAS1LP35410 378 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 ARPC4P59998 168 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 MSMO1Q15800 293 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 DEFB114Q30KQ6 69 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 TIMM50Q3ZCQ8 353 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 OR4A47Q6IF82 309 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 GTSCR1Q86UQ5 136 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 OR2K2Q8NGT1 345 aa13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 KCTD12Q96CX2 325 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-205ENST00000393551 HYDINQ4G0P3 5121 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 A0A0A6YYH2 397 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 TRAV3A0A0B4J244 114 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 A6NJ64 397 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 C2orf70A6NJV1 201 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 SULT1C2O00338 296 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 CD7P09564 240 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 CTRB1P17538 263 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 RPL8P62917 257 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 ZFAND6Q6FIF0 208 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 CTRB2Q6GPI1 263 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 ZNF818PQ6ZRF7 136 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 SPAG16Q8N0X2 631 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 SPATA25Q9BR10 227 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 PLEKHA3Q9HB20 300 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 BET1LQ9NYM9 111 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 SELENOKQ9Y6D0 94 aa13.76□□□□□ -0.21
PDLIM7-205ENST00000393551 MEIS3P1A6NDR6 274 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 GGCTO75223 188 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 TNFAIP8O95379 198 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 HRASP01112 189 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 REG1AP05451 166 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 FOLR2P14207 255 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 HLA-GP17693 338 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 KIR2DS2P43631 304 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 CD81P60033 236 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 CLEC19AQ6UXS0 136 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 CACNG8Q8WXS5 425 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 SLC5A7Q9GZV3 580 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 WFDC10AQ9H1F0 79 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 TUBA4BQ9H853 241 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 ZC4H2Q9NQZ6 224 aa13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 PLECQ15149 4684 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-205ENST00000393551 IGLV11-55A0A075B6I3 123 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 LGALS9O00182 355 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms