RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TNCP24821 2201 aa14.86□□□□□ -0.03
PDLIM7-204ENST00000393546 KBTBD11O94819 623 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 SLC6A1P30531 599 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 ECI1P42126 302 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 LPAR6P43657 344 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 PPP5CP53041 499 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 FAAP20Q6NZ36 180 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 OR5M8Q8NGP6 311 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 OR4A5Q8NH83 315 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 PHB2Q99623 299 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 COMMD9Q9P000 198 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 MGAM2Q2M2H8 2515 aa14.85□□□□□ -0.03
PDLIM7-204ENST00000393546 VWFP04275 2813 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 MSGN1A6NI15 193 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 S1PR2O95136 353 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 MAS1LP35410 378 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 CDX1P47902 265 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 RAB9AP51151 201 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 AP3S2P59780 193 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 RND3P61587 244 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 ZNF79Q15937 498 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 POU2AF1Q16633 256 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 OR4A47Q6IF82 309 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 ZNF695Q8IW36 515 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 KLHL30-AS1Q8NEE0 82 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 DMBX1Q8NFW5 382 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 MARCH1Q8TCQ1 289 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 SRSF12Q8WXF0 261 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 PRRT1Q99946 306 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 KLK15Q9H2R5 256 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 HRASLSQ9HDD0 168 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 SLC2A9Q9NRM0 540 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 FAM212BQ9NTI7 297 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 BET1LQ9NYM9 111 aa14.84□□□□□ -0.03
PDLIM7-204ENST00000393546 CMYA5Q8N3K9 4069 aa14.83□□□□□ -0.03
PDLIM7-204ENST00000393546 MPPED1O15442 326 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 SOX15O60248 233 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 PI3P19957 117 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 PIGPP57054 158 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 ERVK-16P61578 105 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 ZNF585BQ52M93 769 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 TOMM5Q8N4H5 51 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 OR5T1Q8NG75 326 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 MCUBQ9NWR8 336 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 COPZ2Q9P299 210 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 SCP2D1Q9UJQ7 156 aa14.83□□□□□ -0.04
PDLIM7-204ENST00000393546 A6NHS1 94 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 PF4P02776 101 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 CTSDP07339 412 aaPredicted RBP14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 FAUP35544 74 aaKnown RBP14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 RPL8P62917 257 aaKnown RBP14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 SURF2Q15527 256 aaPredicted RBP14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 C18orf65Q6ZTR6 163 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 C8orf86Q6ZUL3 223 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 ZNF491Q8N8L2 437 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 CCDC71LQ8N9Z2 235 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 OR51S1Q8NGJ8 323 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 OR13C8Q8NGS7 320 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 UBE2E2Q96LR5 201 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 SPIN2AQ99865 258 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 SPIN2BQ9BPZ2 258 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 ZNF355PQ9NSJ1 428 aa14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 C14orf166Q9Y224 244 aaKnown RBP14.82□□□□□ -0.04
PDLIM7-204ENST00000393546 UPK2O00526 184 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 KLF9Q13886 244 aaPredicted RBP14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 GDPD1Q8N9F7 314 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 MYOZ3Q8TDC0 251 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 TRIM63Q969Q1 353 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 MS4A10Q96PG2 267 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 SRRQ9GZT4 340 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 TMEM140Q9NV12 185 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 SLC2A8Q9NY64 477 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 VSIG4Q9Y279 399 aa14.81□□□□□ -0.04
PDLIM7-204ENST00000393546 MARCH11A6NNE9 402 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 H3BUA1 57 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 KRASP01116 189 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 SERPINE2P07093 398 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 IL6RP08887 468 aaPredicted RBP14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 RPA2P15927 270 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 HLA-GP17693 338 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 RPL27AP46776 148 aaKnown RBP14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 KIAA0141Q14154 515 aaPredicted RBP14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 ASPHD1Q5U4P2 390 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 CADM3Q8N126 398 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 CASTOR1Q8WTX7 329 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 MRGPRFQ96AM1 343 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 SCGB3A2Q96PL1 93 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 SLA2Q9H6Q3 261 aa14.8□□□□□ -0.04
PDLIM7-204ENST00000393546 C3orf85A0A1B0GTC6 90 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 H0Y980 276 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 APELAP0DMC3 54 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 G6PCP35575 357 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 MYCNOSP40205 109 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 INPP1P49441 399 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 C10orf55Q5SWW7 151 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 NBEAL1Q6ZS30 2694 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 C4orf3Q8WVX3 66 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 DEDD2Q8WXF8 326 aa14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 FYTTD1Q96QD9 318 aaKnown RBP14.79□□□□□ -0.04
PDLIM7-204ENST00000393546 COA4Q9NYJ1 87 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms