RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 MT-ND4LP03901 98 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 CT45A6P0DMU7 189 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 CT45A5P0DMU8 189 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 CT45A7P0DMV0 189 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 DAOP14920 347 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 CD1BP29016 333 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 GNG10P50151 68 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 FGF8P55075 233 aaPredicted RBP7.41□□□□□ -1.22
TDP1-202ENST00000393452 EFNB3Q15768 340 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 FBXL19-AS1Q494R0 122 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 RNF212Q495C1 297 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 FAM90A2PQ658T7 463 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 CA5BP1Q8WTZ4 195 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 TMEM170AQ8WVE7 144 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 SLC39A9Q9NUM3 307 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 A0A087WWC5 75 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 PCP4L1A6NKN8 68 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 ZFP92A6NM28 416 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 SOX15O60248 233 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 HRASP01112 189 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 IFNA10P01566 189 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 MAS1LP35410 378 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 CA7P43166 264 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 RPS16P62249 146 aaKnown RBP7.41□□□□□ -1.22
TDP1-202ENST00000393452 SLC35E3Q7Z769 313 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 CCL17Q92583 94 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 LHX4Q969G2 390 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 ISOC2Q96AB3 205 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 RAB39BQ96DA2 213 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 ZNF714Q96N38 554 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 MS4A5Q9H3V2 200 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 HEYLQ9NQ87 328 aaPredicted RBP7.41□□□□□ -1.22
TDP1-202ENST00000393452 KAAG1Q9UBP8 84 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 VAX2Q9UIW0 290 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 ADGRG4Q8IZF6 3080 aa7.41□□□□□ -1.22
TDP1-202ENST00000393452 IGF2RP11717 2491 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 C17orf112F2Z3M2 114 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 RRHO14718 337 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 APOBEC3AP31941 199 aaPredicted RBP7.4□□□□□ -1.22
TDP1-202ENST00000393452 HSPE1P61604 102 aaKnown RBP7.4□□□□□ -1.22
TDP1-202ENST00000393452 DLK1P80370 383 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 FFAR4Q5NUL3 377 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 TMEM200BQ69YZ2 307 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 ZNF833PQ6ZTB9 187 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 LINC00518Q8N0U6 118 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 ZNF709Q8N972 641 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 OR10G9Q8NGN4 311 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 OR10G7Q8NGN6 311 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 NEUROG1Q92886 237 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 YPEL4Q96NS1 127 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 NIPSNAP3BQ9BS92 247 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 RAXQ9Y2V3 346 aa7.4□□□□□ -1.22
TDP1-202ENST00000393452 A0A1W2PPE2 198 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 MPDU1O75352 247 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 NDUFS6O75380 124 aaKnown RBP7.4□□□□□ -1.23
TDP1-202ENST00000393452 IFNA1P01562 189 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 RAB13P51153 203 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 ERVFRD-1P60508 538 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 HNF4GQ14541 408 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 LYPD2Q6UXB3 125 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 TREML4Q6UXN2 200 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 RBMS3Q6XE24 437 aaKnown RBP7.4□□□□□ -1.23
TDP1-202ENST00000393452 ZNF596Q8TC21 504 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 TVP23CQ96ET8 276 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 SLC25A22Q9H936 323 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 DYNLRB1Q9NP97 96 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 CTSZQ9UBR2 303 aa7.4□□□□□ -1.23
TDP1-202ENST00000393452 KLF2Q9Y5W3 355 aaPredicted RBP7.4□□□□□ -1.23
TDP1-202ENST00000393452 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 SEC14L6B5MCN3 397 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 B9A039 149 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 IGKV1-16P04430 117 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 CCL3L1P16619 93 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 CEBPGP53567 150 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 CASP6P55212 293 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 RAB11AP62491 216 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 RTL8BQ17RB0 113 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 LRRC10Q5BKY1 277 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ABHD12Q8N2K0 398 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 C8orf31Q8N9H6 132 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 OR13D1Q8NGV5 346 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 RAB24Q969Q5 203 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ACTR3CQ9C0K3 210 aaPredicted RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 SLC35D1Q9NTN3 355 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ZNRD1Q9P1U0 126 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 PRNDQ9UKY0 176 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ZNF257Q9Y2Q1 563 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ABCA4P78363 2273 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 SRRM4A7MD48 611 aaKnown RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 NDUFB3O43676 98 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 CD3EP07766 207 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 HOXA1P49639 335 aaPredicted RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 DLX6P56179 175 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 KLRB1Q12918 225 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 HABP2Q14520 560 aaPredicted RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 TMEM249Q2WGJ8 235 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ACOT6Q3I5F7 207 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms