RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PI3P19957 117 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 PPP5CP53041 499 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 SLURP1P55000 103 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 KRTAP10-11P60412 298 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 TMEM267Q0VDI3 215 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 MSMO1Q15800 293 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 PDLIM3Q53GG5 364 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 KPRPQ5T749 579 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR4A47Q6IF82 309 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 PUSL1Q8N0Z8 303 aaKnown RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 TCTEX1D1Q8N7M0 179 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 POC5Q8NA72 575 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR5M8Q8NGP6 311 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR1N2Q8NGR9 330 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR6F1Q8NGZ6 308 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 DIRAS2Q96HU8 199 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 RHOVQ96L33 236 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 UBE2E2Q96LR5 201 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 FYTTD1Q96QD9 318 aaKnown RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 BCL7BQ9BQE9 202 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 RBM38Q9H0Z9 239 aaKnown RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 COA4Q9NYJ1 87 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 MTFP1Q9UDX5 166 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 TEX22C9J3V5 150 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 GPR31O00270 319 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 ACTL6BO94805 426 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR2A4O95047 310 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 REG1AP05451 166 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 LGALS1P09382 135 aaKnown RBP5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 KIR2DS2P43631 304 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 CATR1Q13166 79 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 FHL3Q13643 280 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 IL18Q14116 193 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 RNASE10Q5GAN6 216 aaKnown RBP5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 MMD2Q8IY49 270 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZBTB34Q8NCN2 500 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 ADAD2Q8NCV1 583 aaKnown RBP5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 MCFD2Q8NI22 146 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 TMEM167AQ8TBQ9 72 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 FCAMRQ8WWV6 532 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 RCC1LQ96I51 464 aaKnown RBP5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR2A7Q96R45 310 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 HRASLSQ9HDD0 168 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 TMEM140Q9NV12 185 aa5.93□□□□□ -1.46
HMGB3P1-201ENST00000393368 ANKRD34BA5PLL1 514 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 CGB1A6NKQ9 187 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 GABARAPH6UMI1 98 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 RBFOX2O43251 390 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 HPRT1P00492 218 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 HRASP01112 189 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 TRBV12-3P01733 135 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 IFNA6P05013 189 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 IL6RP08887 468 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 PGAM2P15259 253 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 AREGP15514 252 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 CD40LGP29965 261 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 SLC6A1P30531 599 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 TNFSF8P32971 234 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 G6PCP35575 357 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 LPAR6P43657 344 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 RPL27AP46776 148 aaKnown RBP5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 TAS2R31P59538 309 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF45Q02386 682 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF616Q08AN1 781 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 SCGB2B2Q4G0G5 96 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF585BQ52M93 769 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 VAX1Q5SQQ9 334 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 PYHIN1Q6K0P9 492 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 TBC1D26Q86UD7 250 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 CMTM1Q8IZ96 169 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 TMEM229BQ8NBD8 167 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 DMBX1Q8NFW5 382 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 DCUN1D4Q92564 292 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 DPF1Q92782 380 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 DLX4Q92988 240 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 MRGPRFQ96AM1 343 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 DGCR14Q96DF8 476 aaKnown RBP5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 RSRP1Q9BUV0 290 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 NXF2Q9GZY0 626 aaKnown RBP5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 SLA2Q9H6Q3 261 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 PGPEP1Q9NXJ5 209 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 RSL24D1Q9UHA3 163 aaKnown RBP5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 NSG2Q9Y328 171 aa5.92□□□□□ -1.46
HMGB3P1-201ENST00000393368 C13orf42A0A1B0GVH6 325 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 WI2-2373I1.2A0A1W2PRP0 233 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 SEC14L6B5MCN3 397 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 LINC01619G3V211 115 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 UPK2O00526 184 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 CREBL2O60519 120 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR2J3O76001 311 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 RAB3DO95716 219 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 KRASP01116 189 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 IGKV1-39P01597 117 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 IGHV3-23P01764 117 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 CD74P04233 296 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 IGKV1D-39P04432 117 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR8U8P0C7N1 319 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR9G9P0C7N8 305 aa5.91□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF735P0CB33 412 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms