RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GAGE12FP0CL80 117 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE12GP0CL81 117 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE12IP0CL82 117 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 LHX2P50458 406 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE4Q13068 117 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 SRSF6Q13247 344 aaKnown RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 MFAP5Q13361 173 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 SGCBQ16585 318 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 DOLPP1Q86YN1 238 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 OR4C3Q8NH37 302 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GPX7Q96SL4 187 aaPredicted RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 C19orf24Q9BVV8 132 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 MRPL13Q9BYD1 178 aaKnown RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 PTPRDP23468 1912 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 H3BML4 177 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 EML2O95834 649 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 SSTR5P35346 364 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 FOXA3P55318 350 aaPredicted RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 RPL31P62899 125 aaKnown RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 LYSMD4Q5XG99 296 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 HAPLN4Q86UW8 402 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 DDIT4LQ96D03 193 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 MSI2Q96DH6 328 aaKnown RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 BMFQ96LC9 184 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 NGBQ9NPG2 151 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 CCL28Q9NRJ3 127 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 TMED7-TICAM2A0A0A6YYA0 188 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 TRAV38-1A0A0B4J264 116 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 SPAARA0A1B0GVQ0 90 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 CXorf1O96002 111 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 MYF5P13349 255 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 CTRLP40313 264 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 ANXA2RQ3ZCQ2 193 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 DCAF12Q5T6F0 453 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 ACSM6Q6P461 480 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 DEFB123Q8N688 67 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 PIGCQ92535 297 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 RNF183Q96D59 192 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 BOKQ9UMX3 212 aaPredicted RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 GREB1Q4ZG55 1949 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 LOC107984156A0A0G2JMH3 177 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 GATA2P23769 480 aaPredicted RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 PQLC2Q6ZP29 291 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 ARL17AQ8IVW1 177 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 OSR2Q8N2R0 312 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 RPP25LQ8N5L8 163 aaKnown RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF525Q8N782 197 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 ZIC4Q8N9L1 334 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 OR4X2Q8NGF9 303 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 PP6455Q8WZ26 134 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 OR5P3Q8WZ94 311 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 COX14Q96I36 57 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 PIMREGQ9BSJ6 248 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 COMMD5Q9GZQ3 224 aa6.49□□□□□ -1.37
VTI1A-201ENST00000393077 LIN7CQ9NUP9 197 aaKnown RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 NHP2Q9NX24 153 aaKnown RBP6.49□□□□□ -1.37
VTI1A-201ENST00000393077 THSD7BQ9C0I4 1608 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 ACTL6BO94805 426 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 NKX2-2O95096 273 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 IGHG1P01857 330 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 CD27P26842 260 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 IZUMO4Q1ZYL8 232 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SYT8Q8NBV8 401 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SMRP1Q8NCR6 262 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SCARF2Q96GP6 870 aaPredicted RBP6.48□□□□□ -1.37
VTI1A-201ENST00000393077 A0A1W2PPC4 97 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 F2RL2O00254 374 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 DNPH1O43598 174 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SYNGR1O43759 233 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 PRKNO60260 465 aaPredicted RBP6.48□□□□□ -1.37
VTI1A-201ENST00000393077 CELA2BP08218 269 aaPredicted RBP6.48□□□□□ -1.37
VTI1A-201ENST00000393077 ZFP36L1Q07352 338 aaKnown RBP6.48□□□□□ -1.37
VTI1A-201ENST00000393077 CATR1Q13166 79 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SFTPA2Q8IWL1 248 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 OR10X1Q8NGY0 326 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 KLRF1Q9NZS2 232 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SMPXQ9UHP9 88 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SCO2A0A1W2PP80 73 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 A0A1W2PQF6 199 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 BGLAPP02818 100 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 OR1D5P58170 312 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 GNB1P62873 340 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 ID3Q02535 119 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 H2BFWTQ7Z2G1 175 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 TMEM116Q8NCL8 245 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 VWA8A3KMH1 1905 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 MTCL1Q9Y4B5 1905 aaKnown RBP6.48□□□□□ -1.37
VTI1A-201ENST00000393077 C5orf49A4QMS7 147 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 SYS1-DBNDD2H3BUS1 97 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 CFPP27918 469 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 RPL8P62917 257 aaKnown RBP6.48□□□□□ -1.37
VTI1A-201ENST00000393077 GNG3P63215 75 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 HES1Q14469 280 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 LHFPL2Q6ZUX7 228 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 CT55Q8WUE5 264 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 RCHY1Q96PM5 261 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 OBP2BQ9NPH6 170 aa6.48□□□□□ -1.37
VTI1A-201ENST00000393077 CACNA1HO95180 2353 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms