RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 PATZ1Q9HBE1 687 aaKnown RBP9.56□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ARID1AO14497 2285 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 A0A0U1RQK1 487 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 GAGE12BA1L429 117 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 NPIPB7O75200 414 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 SERF1AO75920 110 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 PLAUP00749 431 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ADMP35318 185 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 DYNLT3P51808 116 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 DSCR9P59020 149 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 OR4A47Q6IF82 309 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 DTX2Q86UW9 622 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 SPATA3Q8NHX4 192 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 TMEM186Q96B77 213 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ZNF48Q96MX3 618 aaPredicted RBP9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 UHRF2Q96PU4 802 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 TSPAN32Q96QS1 320 aa9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ZNF469Q96JG9 3925 aaPredicted RBP9.55□□□□□ -0.88
TRAF3IP2-208ENST00000392556 C22orf46C9J442 243 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 CRLF1O75462 422 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 HLA-HP01893 362 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 CNN3Q15417 329 aaKnown RBP9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 TMEM108Q6UXF1 575 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 SIGLECL1Q8N7X8 197 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 MSI2Q96DH6 328 aaKnown RBP9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ARHGAP5-AS1Q96IT6 56 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 C1orf147Q96MC9 270 aaPredicted RBP9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 IGKV1D-42A0A075B6H8 117 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 RBFOX2O43251 390 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 OR7C2O60412 319 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 LMX1BO60663 402 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 GYPAP02724 150 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 GPX1P07203 203 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ASAH2BP0C7U1 165 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 PIGPP57054 158 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 PPP1CBP62140 327 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 RUNX1Q01196 453 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 BSPH1Q075Z2 132 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 OR4F17Q8NGA8 305 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 OR4F4Q96R69 305 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 CLEC5AQ9NY25 188 aa9.54□□□□□ -0.88
TRAF3IP2-208ENST00000392556 PCNX3Q9H6A9 2034 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 HIVEP2P31629 2446 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 SAA2-SAA4A0A096LPE2 208 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 FOXI3A8MTJ6 420 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 H7C1C5 153 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 P2RY10O00398 339 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 TRAF3IP2O43734 574 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ZNF253O75346 499 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 MPIG6BO95866 241 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 CRISP2P16562 243 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 UCP1P25874 307 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 FFAR4Q5NUL3 377 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 FAM78BQ5VT40 261 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 GLIPR1L1Q6UWM5 242 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 CALHM1Q8IU99 346 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ODF3L1Q8IXM7 274 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 OR52N5Q8NH56 324 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ASB10Q8WXI3 467 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 TMEM59Q9BXS4 323 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 SAMD10Q9BYL1 202 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 RPRMQ9NS64 109 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 DPRXA6NFQ7 191 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ZNF737O75373 536 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 WNT2P09544 360 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ZNF93P35789 620 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 ZNF726P1Q15940 193 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 PRIMA1Q86XR5 153 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 C1orf162Q8NEQ5 155 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 OR5D14Q8NGL3 314 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 RTN4IP1Q8WWV3 396 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 KLHDC3Q9BQ90 382 aa9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 PSMG3Q9BT73 122 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-208ENST00000392556 NSD1Q96L73 2696 aaPredicted RBP9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 A0A1W2PNR3 127 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MLNRO43193 412 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 CD5LO43866 347 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NRASP01111 189 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 KRASP01116 189 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NKX2-1P43699 371 aaPredicted RBP9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PRRX1P54821 245 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 KRTDAPP60985 99 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SP6Q3SY56 376 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZNF440Q8IYI8 595 aa9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 FN1P02751 2386 aaKnown RBP9.52□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SERTM2A0A1B0GWG4 89 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MPZL1O95297 269 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 IFNA5P01569 189 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 STAG3L3P0CL85 134 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PNMTP11086 282 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 IGHV1-2P23083 117 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NPBWR2P48146 333 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TGFBR3Q03167 851 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PMCHL1Q16048 86 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 LCN15Q6UWW0 184 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms