RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 NOL4LQ96MY1 436 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-202ENST00000392351 C20orf85Q9H1P6 137 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 OR51J1Q9H342 316 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 ZNF430Q9H8G1 570 aaPredicted RBP20.04■□□□□ 0.8
HOMER3-202ENST00000392351 PARP11Q9NR21 331 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 TMEM140Q9NV12 185 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 LINC00527Q9UJ94 153 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 HAX1O00165 279 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 PROK1P58294 105 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 ZNF562Q6V9R5 426 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 SLC25A42Q86VD7 318 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 BET1LQ9NYM9 111 aa20.04■□□□□ 0.8
HOMER3-202ENST00000392351 AP4M1O00189 453 aa20.03■□□□□ 0.8
HOMER3-202ENST00000392351 CREBL2O60519 120 aaPredicted RBP20.03■□□□□ 0.8
HOMER3-202ENST00000392351 VAMP1P23763 118 aa20.03■□□□□ 0.8
HOMER3-202ENST00000392351 DHODHQ02127 395 aa20.03■□□□□ 0.8
HOMER3-202ENST00000392351 TMEM167AQ8TBQ9 72 aa20.03■□□□□ 0.8
HOMER3-202ENST00000392351 ENKURQ8TC29 256 aa20.03■□□□□ 0.8
HOMER3-202ENST00000392351 SEC22AQ96IW7 307 aa20.03■□□□□ 0.8
HOMER3-202ENST00000392351 NUDT15Q9NV35 164 aa20.03■□□□□ 0.8
HOMER3-202ENST00000392351 ATP6V0E1O15342 81 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 CNIH1O95406 144 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 ANXA3P12429 323 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 SSBP2P81877 361 aaPredicted RBP20.02■□□□□ 0.8
HOMER3-202ENST00000392351 PPP1R1AQ13522 171 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 TNXAQ16473 311 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 MMD2Q8IY49 270 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 KLHDC1Q8N7A1 406 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 OR4A5Q8NH83 315 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 ABHD5Q8WTS1 349 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 PRR13Q9NZ81 148 aa20.02■□□□□ 0.8
HOMER3-202ENST00000392351 TRAV6A0A075B6T7 132 aa20.01■□□□□ 0.79
HOMER3-202ENST00000392351 CDS2O95674 445 aa20.01■□□□□ 0.79
HOMER3-202ENST00000392351 TMEM187Q14656 261 aa20.01■□□□□ 0.79
HOMER3-202ENST00000392351 FXYD3Q14802 87 aa20.01■□□□□ 0.79
HOMER3-202ENST00000392351 LHFPL5Q8TAF8 219 aa20.01■□□□□ 0.79
HOMER3-202ENST00000392351 ARPC1AQ92747 370 aa20.01■□□□□ 0.79
HOMER3-202ENST00000392351 WNT10AQ9GZT5 417 aa20.01■□□□□ 0.79
HOMER3-202ENST00000392351 ACTL6BO94805 426 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 IGF1P05019 195 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 ANXA7P20073 488 aaKnown RBP20■□□□□ 0.79
HOMER3-202ENST00000392351 AKR1C2P52895 323 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 UBE2MP61081 183 aaKnown RBP20■□□□□ 0.79
HOMER3-202ENST00000392351 C12orf54Q6X4T0 127 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 STPG2Q8N412 459 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 GRPEL2Q8TAA5 225 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 FAM103A1Q9BTL3 118 aaKnown RBP20■□□□□ 0.79
HOMER3-202ENST00000392351 FBXO7Q9Y3I1 522 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 TRAV3A0A0B4J244 114 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 IL6RP08887 468 aaPredicted RBP20■□□□□ 0.79
HOMER3-202ENST00000392351 RPL8P62917 257 aaKnown RBP20■□□□□ 0.79
HOMER3-202ENST00000392351 H2BFWTQ7Z2G1 175 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 NRARPQ7Z6K4 114 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 ZNF695Q8IW36 515 aa20■□□□□ 0.79
HOMER3-202ENST00000392351 RBPMSQ93062 196 aaKnown RBP20■□□□□ 0.79
HOMER3-202ENST00000392351 UPK2O00526 184 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 ATG12O94817 140 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 IGKV1-5P01602 117 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 TMEM268Q5VZI3 342 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 CENPVQ7Z7K6 275 aaPredicted RBP19.99■□□□□ 0.79
HOMER3-202ENST00000392351 CHPT1Q8WUD6 406 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 WFDC12Q8WWY7 111 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 TMEM56Q96MV1 263 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 TMEM56-RWDD3S4R434 201 aa19.99■□□□□ 0.79
HOMER3-202ENST00000392351 TET2Q6N021 2002 aaPredicted RBP19.98■□□□□ 0.79
HOMER3-202ENST00000392351 SFT2D2O95562 160 aa19.98■□□□□ 0.79
HOMER3-202ENST00000392351 HLA-AP01891 365 aaKnown RBP19.98■□□□□ 0.79
HOMER3-202ENST00000392351 OR4E1P0C645 316 aa19.98■□□□□ 0.79
HOMER3-202ENST00000392351 OR9G9P0C7N8 305 aa19.98■□□□□ 0.79
HOMER3-202ENST00000392351 SELENOHQ8IZQ5 122 aaKnown RBP19.98■□□□□ 0.79
HOMER3-202ENST00000392351 CASTOR1Q8WTX7 329 aa19.98■□□□□ 0.79
HOMER3-202ENST00000392351 NUBP2Q9Y5Y2 271 aa19.98■□□□□ 0.79
HOMER3-202ENST00000392351 WSB1Q9Y6I7 421 aa19.98■□□□□ 0.79
HOMER3-202ENST00000392351 EGR2P11161 476 aaPredicted RBP19.97■□□□□ 0.79
HOMER3-202ENST00000392351 HLA-GP17693 338 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 VDAC1P21796 283 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 SRPXP78539 464 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 ECSCRQ19T08 205 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 C4orf46Q504U0 113 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 C10orf55Q5SWW7 151 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 CADM3Q8N126 398 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 SGMS2Q8NHU3 365 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 RNASE11Q8TAA1 199 aaKnown RBP19.97■□□□□ 0.79
HOMER3-202ENST00000392351 SRSF12Q8WXF0 261 aaKnown RBP19.97■□□□□ 0.79
HOMER3-202ENST00000392351 PALMDQ9NP74 551 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 ZNF580Q9UK33 172 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 NSG2Q9Y328 171 aa19.97■□□□□ 0.79
HOMER3-202ENST00000392351 PSMB11A5LHX3 300 aa19.96■□□□□ 0.79
HOMER3-202ENST00000392351 G3V318 75 aa19.96■□□□□ 0.79
HOMER3-202ENST00000392351 H2AFB2P0C5Z0 115 aa19.96■□□□□ 0.79
HOMER3-202ENST00000392351 MAS1LP35410 378 aa19.96■□□□□ 0.79
HOMER3-202ENST00000392351 ZNF329Q86UD4 541 aa19.96■□□□□ 0.79
HOMER3-202ENST00000392351 IL22RA2Q969J5 263 aa19.96■□□□□ 0.79
HOMER3-202ENST00000392351 RRNAD1Q96FB5 475 aaKnown RBP19.96■□□□□ 0.79
HOMER3-202ENST00000392351 C9orf170A2RU37 121 aa19.95■□□□□ 0.78
HOMER3-202ENST00000392351 SNAPC5O75971 98 aa19.95■□□□□ 0.78
HOMER3-202ENST00000392351 MYOD1P15172 320 aa19.95■□□□□ 0.78
HOMER3-202ENST00000392351 RAB25P57735 213 aa19.95■□□□□ 0.78
HOMER3-202ENST00000392351 DHRS2Q13268 280 aa19.95■□□□□ 0.78
HOMER3-202ENST00000392351 IZUMO4Q1ZYL8 232 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms