RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DAND5Q8N907 189 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 FADS6Q8N9I5 356 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 C5orf17Q8NAS9 161 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 OR10AG1Q8NH19 301 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TEX47Q8TBZ9 253 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 DYNC2LI1Q8TCX1 351 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CCL17Q92583 94 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CCDC47Q96A33 483 aaKnown RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 RPEQ96AT9 228 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 PPCDCQ96CD2 204 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 ECHDC3Q96DC8 303 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CCDC126Q96EE4 140 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 SFRP2Q96HF1 295 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 JAKMIP1Q96N16 626 aaKnown RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MTMR9Q96QG7 549 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 PSKH2Q96QS6 385 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 METTL26Q96S19 204 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TP53RKQ96S44 253 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 LINC01587Q99440 93 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MPHOSPH6Q99547 160 aaKnown RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MED18Q9BUE0 208 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 FICDQ9BVA6 458 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TRIM62Q9BVG3 475 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TTTY13Q9BZ97 58 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 SYT4Q9H2B2 425 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 ANKRD19PQ9H560 264 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 WDR55Q9H6Y2 383 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 XAGE1AQ9HD64 81 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 FGF20Q9NP95 211 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB20Q9NX57 234 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MS4A12Q9NXJ0 267 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 ATXN10Q9UBB4 475 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CKLFQ9UBR5 152 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TRIM10Q9UDY6 481 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 POLR3HQ9Y535 204 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CUX2O14529 1486 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CECR2Q9BXF3 1484 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TRIOO75962 3097 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MCM3APO60318 1980 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 KDM6AO15550 1401 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TNS3Q68CZ2 1445 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 AKNAQ7Z591 1439 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 PTPRSQ13332 1948 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 PLXNB3Q9ULL4 1909 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 PNPLA6Q8IY17 1366 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ZFHX4Q86UP3 3567 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 SCN9AQ15858 1988 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 EML6Q6ZMW3 1958 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 LOC107984640A0A0U1RRK4 108 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A1B0GW54 56 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A1W2PRV1 198 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 SMIM30A4D0T7 59 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TRIM64CA6NLI5 447 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 H3BP45 60 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 BOLA2-SMG1P6H3BVE0 249 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CHADO15335 359 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 FGF16O43320 207 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 NDUFS6O75380 124 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 OR2B3O76000 313 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 YEATS4O95619 227 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 MBD3O95983 291 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 IGHV3-30P01768 117 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 IGHV3-33P01772 117 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 HBE1P02100 147 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PRM2P04554 102 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 KRT7P08729 469 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CLTAP09496 248 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GIMD1P0DJR0 217 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 OR8G3PP0DMU2 310 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 IGHV3-30-5P0DP03 117 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 LIPCP11150 499 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CRYGAP11844 174 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GFAPP14136 432 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PDE6GP18545 87 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TNNI3P19429 210 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RPS4Y1P22090 263 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TUBG1P23258 451 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RPS3P23396 243 aaKnown RBP eCLIP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GTF2E2P29084 291 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 OR1E1P30953 314 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PYCR1P32322 319 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CA8P35219 290 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 HSPA9P38646 679 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ACTR1BP42025 376 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CBX5P45973 191 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 HSPA13P48723 471 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PSMD4P55036 377 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 NME5P56597 212 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 C21orf59P57076 290 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB38P57729 211 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 DEFA1P59665 94 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 FKBP1AP62942 108 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 NUCB2P80303 420 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TNFAIP6P98066 277 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PRDX1Q06830 199 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 KLRD1Q13241 179 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 FXYD3Q14802 87 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 EBPQ15125 230 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TOMM34Q15785 309 aaPredicted RBP-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms