RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ZNF98A6NK75 572 aa14.86□□□□□ -0.03
ACTN4-202ENST00000390009 HBE1P02100 147 aa14.86□□□□□ -0.03
ACTN4-202ENST00000390009 NPBWR1P48145 328 aa14.86□□□□□ -0.03
ACTN4-202ENST00000390009 B2MP61769 119 aa14.86□□□□□ -0.03
ACTN4-202ENST00000390009 VWC2Q2TAL6 325 aa14.86□□□□□ -0.03
ACTN4-202ENST00000390009 DHRS7BQ6IAN0 325 aaPredicted RBP14.86□□□□□ -0.03
ACTN4-202ENST00000390009 FOXA2Q9Y261 457 aaPredicted RBP14.86□□□□□ -0.03
ACTN4-202ENST00000390009 H7C2Y5 167 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 IFNA10P01566 189 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 RAB2AP61019 212 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 RPP30P78346 268 aaKnown RBP14.85□□□□□ -0.03
ACTN4-202ENST00000390009 HNF4GQ14541 408 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 CENPVQ7Z7K6 275 aaPredicted RBP14.85□□□□□ -0.03
ACTN4-202ENST00000390009 RARRES2Q99969 163 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 MRPL20Q9BYC9 149 aaKnown RBP14.85□□□□□ -0.03
ACTN4-202ENST00000390009 TMEM14BQ9NUH8 114 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 CACNA1AO00555 2505 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 LRBAP50851 2863 aa14.85□□□□□ -0.03
ACTN4-202ENST00000390009 RBFOX3A6NFN3 312 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 J3QR06 171 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 SCAF4O95104 1147 aaKnown RBP14.84□□□□□ -0.03
ACTN4-202ENST00000390009 C8orf31Q8N9H6 132 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 OR10X1Q8NGY0 326 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 ZNF596Q8TC21 504 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 SPTBN1Q01082 2364 aaKnown RBP14.84□□□□□ -0.03
ACTN4-202ENST00000390009 TRBV23-1A0A0A0MS06 115 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 TRAV1-1A0A0B4J248 108 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 FSTL3O95633 263 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 IGHV2-70P01814 119 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 FGF7P21781 194 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 HOXA1P49639 335 aaPredicted RBP14.84□□□□□ -0.03
ACTN4-202ENST00000390009 ELLP55199 621 aaPredicted RBP14.84□□□□□ -0.03
ACTN4-202ENST00000390009 ZNF726P1Q15940 193 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 TMEM41BQ5BJD5 291 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 LINC00311Q8N616 119 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 SLC35B3Q9H1N7 401 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 SMDT1Q9H4I9 107 aa14.84□□□□□ -0.03
ACTN4-202ENST00000390009 RALYQ9UKM9 306 aaKnown RBP14.84□□□□□ -0.03
ACTN4-202ENST00000390009 SRRM4A7MD48 611 aaKnown RBP14.83□□□□□ -0.04
ACTN4-202ENST00000390009 IGHV1-8P0DP01 117 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 HSPE1P61604 102 aaKnown RBP14.83□□□□□ -0.04
ACTN4-202ENST00000390009 CBLN4Q9NTU7 201 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 MLXQ9UH92 298 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 TNCP24821 2201 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 A0A087X0M5 115 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 A0A1B0GX30 115 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 RRHO14718 337 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 APOA2P02652 100 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 IL6RP08887 468 aaPredicted RBP14.83□□□□□ -0.04
ACTN4-202ENST00000390009 REG1BP48304 166 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 HAGHQ16775 308 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 TMEM88Q6PEY1 159 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 ABHD12Q8N2K0 398 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 C11orf42Q8N5U0 333 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 RCC1LQ96I51 464 aaKnown RBP14.83□□□□□ -0.04
ACTN4-202ENST00000390009 RAB1BQ9H0U4 201 aa14.83□□□□□ -0.04
ACTN4-202ENST00000390009 MALRD1Q5VYJ5 2156 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 H0YJW9 148 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 MDKP21741 143 aaPredicted RBP14.82□□□□□ -0.04
ACTN4-202ENST00000390009 RPL35P42766 123 aaKnown RBP14.82□□□□□ -0.04
ACTN4-202ENST00000390009 AKR1D1P51857 326 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 AVPI1Q5T686 147 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 ZNF841Q6ZN19 808 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 SSX7Q7RTT5 188 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 OR5AN1Q8NGI8 311 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 OR9G1Q8NH87 305 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 MBD3L1Q8WWY6 194 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 TMEM186Q96B77 213 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 NPCDR1Q9BY65 106 aa14.82□□□□□ -0.04
ACTN4-202ENST00000390009 FAM71F2Q6NXP2 309 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 ACSM6Q6P461 480 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 LCN15Q6UWW0 184 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 ETV3LQ6ZN32 361 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 CLDND2Q8NHS1 167 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 PRNDQ9UKY0 176 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 OR51B2Q9Y5P1 312 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 UPK2O00526 184 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 IGKV1D-33P01593 117 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 IGKV1-33P01594 117 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 MYOD1P15172 320 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 CD1BP29016 333 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 DIAPH2-AS1Q14236 149 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 ZNF787Q6DD87 383 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 C11orf71Q6IPW1 123 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 OSR1Q8TAX0 266 aaPredicted RBP14.81□□□□□ -0.04
ACTN4-202ENST00000390009 TMEM170AQ8WVE7 144 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 ST6GALNAC6Q969X2 333 aa14.81□□□□□ -0.04
ACTN4-202ENST00000390009 HRNRQ86YZ3 2850 aaPredicted RBP14.81□□□□□ -0.04
ACTN4-202ENST00000390009 LY6HO94772 140 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 SOD3P08294 240 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 SAA1P0DJI8 122 aaPredicted RBP14.8□□□□□ -0.04
ACTN4-202ENST00000390009 OR13C7P0DN81 318 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 CBLN2Q8IUK8 224 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 C12orf57Q99622 126 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 TMEM133Q9H2Q1 129 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 BET1LQ9NYM9 111 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 PKD1L2Q7Z442 2459 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 PRSS46E5RG02 174 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 UQCRFS1P47985 274 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 ZNF137PP52743 207 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms