RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 OTX2P32243 289 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 SPATA31B1PQ5VZV4 182 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 OR4A47Q6IF82 309 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 MRPL21Q7Z2W9 205 aaKnown RBP12.49□□□□□ -0.41
CTNS-202ENST00000381870 ZNF596Q8TC21 504 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 OR2T8A6NH00 312 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 RNF212BA8MTL3 300 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 FOXH1O75593 365 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 LINC00205P59089 165 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 OR4P4Q8NGL7 312 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 HES4Q9HCC6 221 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 TRGV10A0A0A0MS01 117 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 C9JCJ5 164 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 H0YJW9 148 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 GCHFRP30047 84 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 DSCR4P56555 118 aaPredicted RBP12.48□□□□□ -0.41
CTNS-202ENST00000381870 RHOBP62745 196 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 TNXAQ16473 311 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 LRRC10Q5BKY1 277 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 SPATA46Q5T0L3 261 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 C9orf135Q5VTT2 229 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 LINC00596Q86U02 117 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 MGST2Q99735 147 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 PROK2Q9HC23 129 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 MRPL27Q9P0M9 148 aaKnown RBP12.48□□□□□ -0.41
CTNS-202ENST00000381870 KIAA1549Q9HCM3 1950 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 C5orf49A4QMS7 147 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 ZNF716A6NP11 495 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 TMEM238C9JI98 176 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 CENPWQ5EE01 88 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 Q6P435 159 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 CLEC2AQ6UVW9 174 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 TREML4Q6UXN2 200 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 Q6ZS52 159 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 CORO2AQ92828 525 aa12.48□□□□□ -0.41
CTNS-202ENST00000381870 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
CTNS-202ENST00000381870 SF3B5Q9BWJ5 86 aaKnown RBP12.48□□□□□ -0.41
CTNS-202ENST00000381870 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 NEURL1O76050 574 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 NGFP01138 241 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 OPRK1P41145 380 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 GABRA2P47869 451 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 DUSP3P51452 185 aaPredicted RBP12.47□□□□□ -0.41
CTNS-202ENST00000381870 PDLIM3Q53GG5 364 aaPredicted RBP12.47□□□□□ -0.41
CTNS-202ENST00000381870 AMMECR1LQ6DCA0 310 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 H2BFWTQ7Z2G1 175 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 C18orf32Q8TCD1 76 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 SSMEM1Q8WWF3 244 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
CTNS-202ENST00000381870 A0A096LPE4 126 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 A0A1W2PPZ6 126 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 APCSP02743 223 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 AMY1AP04745 511 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 SLAQ13239 276 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 ZNF497Q6ZNH5 498 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 PQLC2Q6ZP29 291 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 KIR3DL3Q8N743 410 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 ZNF645Q8N7E2 425 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 NUDT11Q96G61 164 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 GGTLC1Q9BX51 225 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 GP6Q9HCN6 339 aa12.47□□□□□ -0.41
CTNS-202ENST00000381870 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 CXCL13O43927 109 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 LTBRP36941 435 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 GNG4P50150 75 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 SELENOVP59797 346 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 RAC3P60763 192 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 ASPHD1Q5U4P2 390 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 PRRG4Q9BZD6 226 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 NCOR1P1Q9H4R4 102 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 WASHC3Q9Y3C0 194 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 LY96Q9Y6Y9 160 aa12.46□□□□□ -0.41
CTNS-202ENST00000381870 A0A1W2PR77 199 aa12.46□□□□□ -0.42
CTNS-202ENST00000381870 CELA3BP08861 270 aa12.46□□□□□ -0.42
CTNS-202ENST00000381870 CLDN18P56856 261 aa12.46□□□□□ -0.42
CTNS-202ENST00000381870 ARF1P84077 181 aaKnown RBP12.46□□□□□ -0.42
CTNS-202ENST00000381870 YRDCQ86U90 279 aaKnown RBP12.46□□□□□ -0.42
CTNS-202ENST00000381870 AKIRIN1Q9H9L7 192 aaPredicted RBP12.46□□□□□ -0.42
CTNS-202ENST00000381870 R4GN57 208 aa12.46□□□□□ -0.42
CTNS-202ENST00000381870 M0R2Z0 102 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 RAB29O14966 203 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 IGLV3-19P01714 112 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 TBR1Q16650 682 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 SLC24A4Q8NFF2 622 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 OR8B3Q8NGG8 313 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 OR8B2Q96RD0 313 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 OR2H2O95918 312 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 NUDT3O95989 172 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
CTNS-202ENST00000381870 CGAP01215 116 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 CRYBB3P26998 211 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 EIF4EBP1Q13541 118 aaPredicted RBP12.45□□□□□ -0.42
CTNS-202ENST00000381870 MOB1BQ7L9L4 216 aa12.45□□□□□ -0.42
CTNS-202ENST00000381870 TECRQ9NZ01 308 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms